RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 DTNAQ9Y4J8 743 aa10.62□□□□□ -0.71
CHFR-219ENST00000541341 ZDBF2Q9HCK1 2354 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 FAM237BA0A1B0GVD1 139 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 TCRBV5S1A1TA0A578 114 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 BUD23O43709 281 aaKnown RBP10.61□□□□□ -0.71
CHFR-219ENST00000541341 TSPAN1O60635 241 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 PRKCBP05771 671 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 FAM58BPP0C7Q3 252 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 KRT10P13645 584 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 IDO1P14902 403 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 FDFT1P37268 417 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 TUBP50607 506 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 TUBA4AP68366 448 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 CREB5Q02930 508 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 KDSRQ06136 332 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 NCOA4Q13772 614 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 DPYSQ14117 519 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 KCNJ11Q14654 390 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 FASTKD3Q14CZ7 662 aaKnown RBP10.61□□□□□ -0.71
CHFR-219ENST00000541341 HERC3Q15034 1050 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 NOMO1Q15155 1222 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 CNGA3Q16281 694 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 DUOXA2Q1HG44 320 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 USP41Q3LFD5 358 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 TBC1D25Q3MII6 688 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 OGFRL1Q5TC84 451 aaPredicted RBP10.61□□□□□ -0.71
CHFR-219ENST00000541341 IRAK1BP1Q5VVH5 260 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 TWF2Q6IBS0 349 aaKnown RBP10.61□□□□□ -0.71
CHFR-219ENST00000541341 PDE12Q6L8Q7 609 aaKnown RBP10.61□□□□□ -0.71
CHFR-219ENST00000541341 CES5AQ6NT32 575 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 TMC5Q6UXY8 1006 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 TMEM105Q8N8V8 129 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 RDH11Q8TC12 318 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 SPATA18Q8TC71 538 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 SLC26A7Q8TE54 656 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 CASP10Q92851 521 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 RIPOR3Q96MK2 946 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 BIRC8Q96P09 236 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 MCEEQ96PE7 176 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 TUBGCP5Q96RT8 1024 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 NUF2Q9BZD4 464 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 NIF3L1Q9GZT8 377 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 CCDC68Q9H2F9 335 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 NGRNQ9NPE2 291 aaKnown RBP10.61□□□□□ -0.71
CHFR-219ENST00000541341 FBXO6Q9NRD1 293 aaPredicted RBP10.61□□□□□ -0.71
CHFR-219ENST00000541341 METTL5Q9NRN9 209 aaKnown RBP10.61□□□□□ -0.71
CHFR-219ENST00000541341 TUBA8Q9NY65 449 aaPredicted RBP10.61□□□□□ -0.71
CHFR-219ENST00000541341 TXNDC16Q9P2K2 825 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 VTI1BQ9UEU0 232 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 STK39Q9UEW8 545 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 LZTS1Q9Y250 596 aa10.61□□□□□ -0.71
CHFR-219ENST00000541341 A0A088AWK7 358 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 HACD1B0YJ81 288 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 INO80B-WBP1J3KQ70 363 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 HOXA2O43364 376 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 B4GALT3O60512 393 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 CBFA2T3O75081 653 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 ASS1P00966 412 aaKnown RBP10.6□□□□□ -0.71
CHFR-219ENST00000541341 TNNC2P02585 160 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 ITGA2BP08514 1039 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 ZCCHC18P0CG32 403 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 HARSP12081 509 aaKnown RBP10.6□□□□□ -0.71
CHFR-219ENST00000541341 AMPD1P23109 780 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 PPM1AP35813 382 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 ALDH7A1P49419 539 aaKnown RBP10.6□□□□□ -0.71
CHFR-219ENST00000541341 AFF1P51825 1210 aaKnown RBP10.6□□□□□ -0.71
CHFR-219ENST00000541341 ESRRGP62508 458 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 FRG1Q14331 258 aaKnown RBP10.6□□□□□ -0.71
CHFR-219ENST00000541341 MAPRE2Q15555 327 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 TRIP10Q15642 601 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 FNBP1LQ5T0N5 605 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 TMEM184AQ6ZMB5 413 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 ZNF598Q86UK7 904 aaKnown RBP10.6□□□□□ -0.71
CHFR-219ENST00000541341 KBTBD6Q86V97 674 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 ERI1Q8IV48 349 aaKnown RBP10.6□□□□□ -0.71
CHFR-219ENST00000541341 NDUFAF2Q8N183 169 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 NUP93Q8N1F7 819 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 AFAP1L2Q8N4X5 818 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 PPM1NQ8N819 430 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 MRPL43Q8N983 215 aaKnown RBP10.6□□□□□ -0.71
CHFR-219ENST00000541341 ST13P5Q8NFI4 369 aaPredicted RBP10.6□□□□□ -0.71
CHFR-219ENST00000541341 RP9Q8TA86 221 aaKnown RBP10.6□□□□□ -0.71
CHFR-219ENST00000541341 TMEM169Q96HH4 297 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 PWWP2AQ96N64 755 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 ACO2Q99798 780 aaKnown RBP10.6□□□□□ -0.71
CHFR-219ENST00000541341 HERPUD2Q9BSE4 406 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 MRPL4Q9BYD3 311 aaKnown RBP10.6□□□□□ -0.71
CHFR-219ENST00000541341 DRC3Q9H069 523 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 CYP3A43Q9HB55 503 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 PTPRHQ9HD43 1115 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 CHST12Q9NRB3 414 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 VPS45Q9NRW7 570 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 NSMCE4AQ9NXX6 385 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 CHORDC1Q9UHD1 332 aaPredicted RBP10.6□□□□□ -0.71
CHFR-219ENST00000541341 PTBP2Q9UKA9 531 aaKnown RBP10.6□□□□□ -0.71
CHFR-219ENST00000541341 CHMP2BQ9UQN3 213 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 PIN4Q9Y237 131 aaKnown RBP10.6□□□□□ -0.71
CHFR-219ENST00000541341 TNFSF13BQ9Y275 285 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 AK5Q9Y6K8 562 aa10.6□□□□□ -0.71
CHFR-219ENST00000541341 MIA3Q5JRA6 1907 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms