RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 POPDC2Q9HBU9 364 aa7.5□□□□□ -1.21
YBX3-209ENST00000540747 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.5□□□□□ -1.21
YBX3-209ENST00000540747 CEP83Q9Y592 693 aa7.5□□□□□ -1.21
YBX3-209ENST00000540747 TEX15Q9BXT5 2789 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 RP1P56715 2156 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 PMS2P1A4D2B8 440 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 C1QTNF3-AMACRE9PGA6 284 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 I6L893 689 aaPredicted RBP7.49□□□□□ -1.21
YBX3-209ENST00000540747 K7ENP7 123 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 SLC31A1O15431 190 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 FFAR2O15552 330 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 ZNF821O75541 412 aaPredicted RBP7.49□□□□□ -1.21
YBX3-209ENST00000540747 MT-CO1P00395 513 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 MYF5P13349 255 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 NME1P15531 152 aaKnown RBP7.49□□□□□ -1.21
YBX3-209ENST00000540747 PTMSP20962 102 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 HNRNPA2B1P22626 353 aaKnown RBP7.49□□□□□ -1.21
YBX3-209ENST00000540747 NNMTP40261 264 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 PDX1P52945 283 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 CLDN2P57739 230 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 YWHAZP63104 245 aaKnown RBP7.49□□□□□ -1.21
YBX3-209ENST00000540747 KRT85P78386 507 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 DAB2P98082 770 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 VAC14Q08AM6 782 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 PNOCQ13519 176 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 AUHQ13825 339 aaKnown RBP7.49□□□□□ -1.21
YBX3-209ENST00000540747 FZD2Q14332 565 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 POM121L1PQ3SYA9 428 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 TAF1BQ53T94 588 aaPredicted RBP7.49□□□□□ -1.21
YBX3-209ENST00000540747 RABGAP1LQ5R372 815 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 TPRG1LQ5T0D9 272 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 ARHGAP40Q5TG30 622 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 SEL1L3Q68CR1 1132 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 INO80CQ6PI98 192 aaPredicted RBP7.49□□□□□ -1.21
YBX3-209ENST00000540747 FOXR2Q6PJQ5 311 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 KYAT3Q6YP21 454 aaKnown RBP7.49□□□□□ -1.21
YBX3-209ENST00000540747 TMC6Q7Z403 805 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 C14orf80Q86SX3 495 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 CLEC14AQ86T13 490 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 FMR1NBQ8N0W7 255 aaPredicted RBP7.49□□□□□ -1.21
YBX3-209ENST00000540747 PPM1KQ8N3J5 372 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 ATP6V0D2Q8N8Y2 350 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 ZNF548Q8NEK5 533 aaPredicted RBP7.49□□□□□ -1.21
YBX3-209ENST00000540747 TMIEQ8NEW7 156 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 KCNE4Q8WWG9 221 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 GRAMD1AQ96CP6 724 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 NAF1Q96HR8 494 aaKnown RBP7.49□□□□□ -1.21
YBX3-209ENST00000540747 BMFQ96LC9 184 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 CEP63Q96MT8 703 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 SLC46A1Q96NT5 459 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 GSDMAQ96QA5 445 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 HDAC8Q9BY41 377 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 THAP9Q9H5L6 903 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 FZD3Q9NPG1 666 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 ANLNQ9NQW6 1124 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 ASNSD1Q9NWL6 643 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 ZNF212Q9UDV6 495 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 KLF15Q9UIH9 416 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 PCDHGA8Q9Y5G5 932 aa7.49□□□□□ -1.21
YBX3-209ENST00000540747 USP9YO00507 2555 aaPredicted RBP7.48□□□□□ -1.21
YBX3-209ENST00000540747 SPTY2D1-AS1A0A0U1RR47 76 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 POM121BA6NF01 834 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 K7ERQ8 282 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 RIOK3O14730 519 aaKnown RBP7.48□□□□□ -1.21
YBX3-209ENST00000540747 RAD51BO15315 384 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 KLK10O43240 276 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 SMAD6O43541 496 aaKnown RBP7.48□□□□□ -1.21
YBX3-209ENST00000540747 SNAP91O60641 907 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 CLDN11O75508 207 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 NEBLO76041 1014 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 CNTN5O94779 1100 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 CSF2P04141 144 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 GLI1P08151 1106 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 SLC2A3P11169 496 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 CD44P16070 742 aaKnown RBP7.48□□□□□ -1.21
YBX3-209ENST00000540747 TGM2P21980 687 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 AKT2P31751 481 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 CCR1P32246 355 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 CHRNA3P32297 505 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 MLLT3P42568 568 aaPredicted RBP7.48□□□□□ -1.21
YBX3-209ENST00000540747 PDCLQ13371 301 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 LY6DQ14210 128 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 BROXQ5VW32 411 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 TTI2Q6NXR4 508 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 ERN2Q76MJ5 926 aaKnown RBP7.48□□□□□ -1.21
YBX3-209ENST00000540747 RRAGAQ7L523 313 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 DCP2Q8IU60 420 aaKnown RBP7.48□□□□□ -1.21
YBX3-209ENST00000540747 TRIM59Q8IWR1 403 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 WDTC1Q8N5D0 677 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 CHST14Q8NCH0 376 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 EHBP1Q8NDI1 1231 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 FAM174AQ8TBP5 190 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 ZNF606Q8WXB4 792 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 KLK6Q92876 244 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 MED8Q96G25 268 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 ATXN7L3BQ96GX2 97 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 RPRD1AQ96P16 312 aaPredicted RBP7.48□□□□□ -1.21
YBX3-209ENST00000540747 MED15Q96RN5 788 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 CPXM1Q96SM3 734 aa7.48□□□□□ -1.21
YBX3-209ENST00000540747 KLF6Q99612 283 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms