RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 UNGP13051 313 aaPredicted RBP10.63□□□□□ -0.71
CDCA3-208ENST00000540683 RHOQP17081 205 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 TNFAIP3P21580 790 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 GPD1P21695 349 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 FLT3P36888 993 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 CTSOP43234 321 aaPredicted RBP10.63□□□□□ -0.71
CDCA3-208ENST00000540683 ATP11AP98196 1134 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 FMO1Q01740 532 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 STAT4Q14765 748 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 RWDD4Q6NW29 188 aaKnown RBP10.63□□□□□ -0.71
CDCA3-208ENST00000540683 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.63□□□□□ -0.71
CDCA3-208ENST00000540683 CIR1Q86X95 450 aaPredicted RBP10.63□□□□□ -0.71
CDCA3-208ENST00000540683 FAM131BQ86XD5 332 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 DCP2Q8IU60 420 aaKnown RBP10.63□□□□□ -0.71
CDCA3-208ENST00000540683 GALNT15Q8N3T1 639 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 MFSD2AQ8NA29 543 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 PIP4K2CQ8TBX8 421 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 RXFP2Q8WXD0 754 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 RAB7BQ96AH8 199 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 TBC1D31Q96DN5 1066 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 MYEOVQ96EZ4 313 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 ALG14Q96F25 216 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 SERAC1Q96JX3 654 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 EPAS1Q99814 870 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 AGPAT1Q99943 283 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 C11orf70Q9BRQ4 267 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 HDAC8Q9BY41 377 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 CD93Q9NPY3 652 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 PARVAQ9NVD7 372 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 IL36AQ9UHA7 158 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 VPS51Q9UID3 782 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 PPM1HQ9ULR3 514 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 OR51B4Q9Y5P0 310 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 BZW2Q9Y6E2 419 aaKnown RBP10.63□□□□□ -0.71
CDCA3-208ENST00000540683 CEP295Q9C0D2 2601 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 ADAMTS9Q9P2N4 1935 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 NYNRINQ9P2P1 1898 aaKnown RBP10.62□□□□□ -0.71
CDCA3-208ENST00000540683 A0A1W2PQC6 194 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 C2CD4BA6NLJ0 364 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 CBX4O00257 560 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 KPNA3O00505 521 aaPredicted RBP10.62□□□□□ -0.71
CDCA3-208ENST00000540683 FGF10O15520 208 aaPredicted RBP10.62□□□□□ -0.71
CDCA3-208ENST00000540683 TNFSF14O43557 240 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 LATO43561 262 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 SH3BP5O60239 455 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 RAMP2O60895 175 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 IGHV4-34P06331 123 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 PROS1P07225 676 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 C1SP09871 688 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 SRCP12931 536 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 AKT2P31751 481 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 L1CAMP32004 1257 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 CHRNA3P32297 505 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 STK19P49842 368 aaPredicted RBP10.62□□□□□ -0.71
CDCA3-208ENST00000540683 ZNF165P49910 485 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 SERPINH1P50454 418 aaKnown RBP10.62□□□□□ -0.71
CDCA3-208ENST00000540683 ZNF143P52747 638 aaPredicted RBP10.62□□□□□ -0.71
CDCA3-208ENST00000540683 YBEYP58557 167 aaPredicted RBP10.62□□□□□ -0.71
CDCA3-208ENST00000540683 SNRPD1P62314 119 aaKnown RBP10.62□□□□□ -0.71
CDCA3-208ENST00000540683 GNA12Q03113 381 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 SCAPQ12770 1279 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 GRM3Q14832 879 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 CDO1Q16878 200 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 UNQ6494/PRO21346Q6UXR6 183 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 DBX2Q6ZNG2 339 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 Q6ZVU0 165 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 BNIPLQ7Z465 357 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 TFAP2DQ7Z6R9 452 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 SLFN11Q7Z7L1 901 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 AADATQ8N5Z0 425 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 AOPEPQ8N6M6 819 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 FAM172AQ8WUF8 416 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 CENPIQ92674 756 aaPredicted RBP10.62□□□□□ -0.71
CDCA3-208ENST00000540683 FAM131CQ96AQ9 280 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 ELF4Q99607 663 aaPredicted RBP10.62□□□□□ -0.71
CDCA3-208ENST00000540683 CNPY3Q9BT09 278 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 SPON2Q9BUD6 331 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 OSBPL1AQ9BXW6 950 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 MRPL47Q9HD33 250 aaKnown RBP10.62□□□□□ -0.71
CDCA3-208ENST00000540683 PCOLCE2Q9UKZ9 415 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 MSRB2Q9Y3D2 182 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 SCINQ9Y6U3 715 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 CHD8Q9HCK8 2581 aa10.62□□□□□ -0.71
CDCA3-208ENST00000540683 EPG5Q9HCE0 2579 aa10.61□□□□□ -0.71
CDCA3-208ENST00000540683 FAM221BA6H8Z2 402 aa10.61□□□□□ -0.71
CDCA3-208ENST00000540683 TLR4O00206 839 aa10.61□□□□□ -0.71
CDCA3-208ENST00000540683 GIPC1O14908 333 aa10.61□□□□□ -0.71
CDCA3-208ENST00000540683 BNIP3LO60238 219 aa10.61□□□□□ -0.71
CDCA3-208ENST00000540683 RNF8O76064 485 aa10.61□□□□□ -0.71
CDCA3-208ENST00000540683 CNTN5O94779 1100 aa10.61□□□□□ -0.71
CDCA3-208ENST00000540683 SERPINC1P01008 464 aa10.61□□□□□ -0.71
CDCA3-208ENST00000540683 ITGAVP06756 1048 aa10.61□□□□□ -0.71
CDCA3-208ENST00000540683 PLEKP08567 350 aaPredicted RBP10.61□□□□□ -0.71
CDCA3-208ENST00000540683 MYBL1P10243 752 aa10.61□□□□□ -0.71
CDCA3-208ENST00000540683 GZMAP12544 262 aa10.61□□□□□ -0.71
CDCA3-208ENST00000540683 CTSKP43235 329 aa10.61□□□□□ -0.71
CDCA3-208ENST00000540683 SUOXP51687 545 aa10.61□□□□□ -0.71
CDCA3-208ENST00000540683 NEK3P51956 506 aa10.61□□□□□ -0.71
CDCA3-208ENST00000540683 RPS21P63220 83 aaKnown RBP10.61□□□□□ -0.71
CDCA3-208ENST00000540683 KIF19Q2TAC6 998 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms