RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 PLK4O00444 970 aa15.65■□□□□ 0.1
UBE3B-211ENST00000539843 CNTN5O94779 1100 aa15.65■□□□□ 0.1
UBE3B-211ENST00000539843 PCDH8O95206 1070 aa15.65■□□□□ 0.1
UBE3B-211ENST00000539843 IRAK1P51617 712 aa15.65■□□□□ 0.1
UBE3B-211ENST00000539843 GEMIN4P57678 1058 aaKnown RBP15.65■□□□□ 0.1
UBE3B-211ENST00000539843 ALFQ53S48 1182 aa15.65■□□□□ 0.1
UBE3B-211ENST00000539843 TCP11X2Q5H9J9 407 aa15.65■□□□□ 0.1
UBE3B-211ENST00000539843 MIIPQ5JXC2 388 aa15.65■□□□□ 0.1
UBE3B-211ENST00000539843 C22orf39Q6P5X5 142 aa15.65■□□□□ 0.1
UBE3B-211ENST00000539843 ARCQ7LC44 396 aa15.65■□□□□ 0.1
UBE3B-211ENST00000539843 ZSCAN30Q86W11 494 aa15.65■□□□□ 0.1
UBE3B-211ENST00000539843 GRIN3AQ8TCU5 1115 aa15.65■□□□□ 0.1
UBE3B-211ENST00000539843 NT5C3BQ969T7 300 aa15.65■□□□□ 0.1
UBE3B-211ENST00000539843 ATP13A1Q9HD20 1204 aa15.65■□□□□ 0.1
UBE3B-211ENST00000539843 MPP6Q9NZW5 540 aa15.65■□□□□ 0.1
UBE3B-211ENST00000539843 TRABD2BA6NFA1 517 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 TAF4O00268 1085 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 SNAP91O60641 907 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 ALPPL2P10696 532 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 DESP17661 470 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 RRM1P23921 792 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 SDC4P31431 198 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 FLT3P36888 993 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 DNA2P51530 1060 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 NEK3P51956 506 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 DAB2P98082 770 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 CYP4F3Q08477 520 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 OTUD1Q5VV17 481 aaPredicted RBP15.64■□□□□ 0.09
UBE3B-211ENST00000539843 NAA35Q5VZE5 725 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 TRIM72Q6ZMU5 477 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 ERN2Q76MJ5 926 aaKnown RBP15.64■□□□□ 0.09
UBE3B-211ENST00000539843 HORMAD1Q86X24 394 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 FAM131BQ86XD5 332 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 PCDH20Q8N6Y1 951 aaKnown RBP15.64■□□□□ 0.09
UBE3B-211ENST00000539843 OR52K2Q8NGK3 314 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 OR2A12Q8NGT7 310 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 PCMTD1Q96MG8 357 aaPredicted RBP15.64■□□□□ 0.09
UBE3B-211ENST00000539843 RETREG1Q9H6L5 497 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 ARHGAP20Q9P2F6 1191 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 HPCAL4Q9UM19 191 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 RAXQ9Y2V3 346 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 GPSM3Q9Y4H4 160 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 CABIN1Q9Y6J0 2220 aa15.64■□□□□ 0.09
UBE3B-211ENST00000539843 KNL1Q8NG31 2342 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 IGLV3-10A0A075B6K4 115 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 A0A0D9SEW6 157 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 A0A1W2PQU0 124 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 FAM149AA5PLN7 773 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 ANKRD62A6NC57 917 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 C10orf142B7Z368 130 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 WNT9AO14904 365 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 SLC31A1O15431 190 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 THEGLP0DJG4 465 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 CKMT2P17540 419 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 HNRNPA2B1P22626 353 aaKnown RBP15.63■□□□□ 0.09
UBE3B-211ENST00000539843 SERPINH1P50454 418 aaKnown RBP15.63■□□□□ 0.09
UBE3B-211ENST00000539843 METAP1P53582 386 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 POLD3Q15054 466 aaPredicted RBP15.63■□□□□ 0.09
UBE3B-211ENST00000539843 SHBQ15464 509 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 PIP5KL1Q5T9C9 394 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 FBXL19Q6PCT2 694 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 NOP9Q86U38 636 aaKnown RBP15.63■□□□□ 0.09
UBE3B-211ENST00000539843 EPS8L1Q8TE68 723 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 CPA5Q8WXQ8 436 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 CFAP57Q96MR6 1250 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 PSMB7Q99436 277 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 CALN1Q9BXU9 219 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 HDAC8Q9BY41 377 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 SCUBE2Q9NQ36 999 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 METTL5Q9NRN9 209 aaKnown RBP15.63■□□□□ 0.09
UBE3B-211ENST00000539843 PPARGC1AQ9UBK2 798 aaKnown RBP15.63■□□□□ 0.09
UBE3B-211ENST00000539843 PKD1L2Q7Z442 2459 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 ZFHX4Q86UP3 3567 aa15.63■□□□□ 0.09
UBE3B-211ENST00000539843 FRYQ5TBA9 3013 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 CXorf51AA0A1B0GTR3 108 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 NEMP2A6NFY4 417 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 MT-CO1P00395 513 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 CAPNS1P04632 268 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 MMEP08473 750 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 TFE3P19532 575 aaPredicted RBP15.62■□□□□ 0.09
UBE3B-211ENST00000539843 NSFP46459 744 aaKnown RBP15.62■□□□□ 0.09
UBE3B-211ENST00000539843 ACADVLP49748 655 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 NOMO3P69849 1222 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 ATP11AP98196 1134 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 GNA12Q03113 381 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 KCNMA1Q12791 1236 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 BNIP3Q12983 259 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 DNAJC3Q13217 504 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 ARSIQ5FYB1 569 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 HES3Q5TGS1 186 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 SFMBT2Q5VUG0 894 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 KIAA1161Q6NSJ0 714 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 RWDD4Q6NW29 188 aaKnown RBP15.62■□□□□ 0.09
UBE3B-211ENST00000539843 C19orf48Q6RUI8 117 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 LINGO4Q6UY18 593 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 LRRC69Q6ZNQ3 347 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 SPATS2Q86XZ4 545 aaKnown RBP15.62■□□□□ 0.09
UBE3B-211ENST00000539843 DCP2Q8IU60 420 aaKnown RBP15.62■□□□□ 0.09
UBE3B-211ENST00000539843 DRC7Q8IY82 874 aa15.62■□□□□ 0.09
UBE3B-211ENST00000539843 RYBPQ8N488 228 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms