RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 SPANXN3Q5MJ09 141 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 FAM72AQ5TYM5 149 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 FAM72DQ6L9T8 149 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 FAM72BQ86X60 149 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 NLRP7Q8WX94 980 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 OMDQ99983 421 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 PCDHAC1Q9H158 963 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 Q9H521 79 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 OXSMQ9NWU1 459 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.65■□□□□ 0.9
TMEM260-203ENST00000539559 GJD2Q9UKL4 321 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 KPNA7A9QM74 516 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 RPL14P50914 215 aaKnown RBP20.65■□□□□ 0.9
TMEM260-203ENST00000539559 ART3Q13508 389 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 CLEC14AQ86T13 490 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 TICAM1Q8IUC6 712 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 KCTD4Q8WVF5 259 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 TMIGD2Q96BF3 282 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 VPS39Q96JC1 886 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 EPB41L1Q9H4G0 881 aa20.65■□□□□ 0.9
TMEM260-203ENST00000539559 DNAJC25-GNG10A0A024R161 153 aa20.64■□□□□ 0.9
TMEM260-203ENST00000539559 FAM200BP0CF97 657 aa20.64■□□□□ 0.9
TMEM260-203ENST00000539559 HDCP19113 662 aa20.64■□□□□ 0.9
TMEM260-203ENST00000539559 NUMBP49757 651 aa20.64■□□□□ 0.9
TMEM260-203ENST00000539559 TMEM62Q0P6H9 643 aa20.64■□□□□ 0.9
TMEM260-203ENST00000539559 MPP3Q13368 585 aa20.64■□□□□ 0.9
TMEM260-203ENST00000539559 IL23RQ5VWK5 629 aa20.64■□□□□ 0.9
TMEM260-203ENST00000539559 CEP70Q8NHQ1 597 aa20.64■□□□□ 0.9
TMEM260-203ENST00000539559 SGF29Q96ES7 293 aa20.64■□□□□ 0.9
TMEM260-203ENST00000539559 SNTG2Q9NY99 539 aa20.64■□□□□ 0.9
TMEM260-203ENST00000539559 ADA2Q9NZK5 511 aa20.64■□□□□ 0.9
TMEM260-203ENST00000539559 RAB26Q9ULW5 256 aa20.64■□□□□ 0.9
TMEM260-203ENST00000539559 PRPF19Q9UMS4 504 aaKnown RBP20.64■□□□□ 0.9
TMEM260-203ENST00000539559 CITO14578 2027 aa20.64■□□□□ 0.89
TMEM260-203ENST00000539559 NUP205Q92621 2012 aa20.64■□□□□ 0.89
TMEM260-203ENST00000539559 HBP1O60381 514 aa20.64■□□□□ 0.89
TMEM260-203ENST00000539559 TNFAIP8O95379 198 aa20.64■□□□□ 0.89
TMEM260-203ENST00000539559 FAM58BPP0C7Q3 252 aa20.64■□□□□ 0.89
TMEM260-203ENST00000539559 TXNP10599 105 aaKnown RBP20.64■□□□□ 0.89
TMEM260-203ENST00000539559 SLC5A2P31639 672 aa20.64■□□□□ 0.89
TMEM260-203ENST00000539559 KCNMB4Q86W47 210 aa20.64■□□□□ 0.89
TMEM260-203ENST00000539559 CCNYL1Q8N7R7 359 aa20.64■□□□□ 0.89
TMEM260-203ENST00000539559 SLC2A14Q8TDB8 520 aa20.64■□□□□ 0.89
TMEM260-203ENST00000539559 LRRC40Q9H9A6 602 aa20.64■□□□□ 0.89
TMEM260-203ENST00000539559 NDUFA13Q9P0J0 144 aa20.64■□□□□ 0.89
TMEM260-203ENST00000539559 MRPL42Q9Y6G3 142 aaKnown RBP20.64■□□□□ 0.89
TMEM260-203ENST00000539559 HACD1B0YJ81 288 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 RPL10P27635 214 aaKnown RBP20.63■□□□□ 0.89
TMEM260-203ENST00000539559 NMBRP28336 390 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 PPARGP37231 505 aaPredicted RBP20.63■□□□□ 0.89
TMEM260-203ENST00000539559 NDUFV1P49821 464 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 NAB1Q13506 487 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 MYBPC3Q14896 1274 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 METTL21CQ5VZV1 264 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 GK5Q6ZS86 529 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 LCA5Q86VQ0 697 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 RP9Q8TA86 221 aaKnown RBP20.63■□□□□ 0.89
TMEM260-203ENST00000539559 PDCD6IPQ8WUM4 868 aaKnown RBP20.63■□□□□ 0.89
TMEM260-203ENST00000539559 MRPS26Q9BYN8 205 aaKnown RBP20.63■□□□□ 0.89
TMEM260-203ENST00000539559 ZNF408Q9H9D4 720 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 EIF2B3Q9NR50 452 aaKnown RBP20.63■□□□□ 0.89
TMEM260-203ENST00000539559 TMCO1Q9UM00 188 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 SCN4AP35499 1836 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 C7orf72A4D263 438 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 ZNF487B1APH4 448 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 TMEM114B3SHH9 223 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 ZBTB24O43167 697 aaPredicted RBP20.63■□□□□ 0.89
TMEM260-203ENST00000539559 ME2P23368 584 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 OTUD1Q5VV17 481 aaPredicted RBP20.63■□□□□ 0.89
TMEM260-203ENST00000539559 SYPL2Q5VXT5 272 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 TMEM151AQ8N4L1 468 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 APBA2Q99767 749 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 NAT9Q9BTE0 207 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 SMARCAD1Q9H4L7 1026 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 RAP2CQ9Y3L5 183 aa20.63■□□□□ 0.89
TMEM260-203ENST00000539559 TSPAN1O60635 241 aa20.62■□□□□ 0.89
TMEM260-203ENST00000539559 TMCC1O94876 653 aa20.62■□□□□ 0.89
TMEM260-203ENST00000539559 PTPN3P26045 913 aa20.62■□□□□ 0.89
TMEM260-203ENST00000539559 ADIGQ0VDE8 80 aa20.62■□□□□ 0.89
TMEM260-203ENST00000539559 RPS27LQ71UM5 84 aaKnown RBP20.62■□□□□ 0.89
TMEM260-203ENST00000539559 BFARQ9NZS9 450 aa20.62■□□□□ 0.89
TMEM260-203ENST00000539559 RUVBL2Q9Y230 463 aaKnown RBP20.62■□□□□ 0.89
TMEM260-203ENST00000539559 COPG1Q9Y678 874 aaKnown RBP20.62■□□□□ 0.89
TMEM260-203ENST00000539559 UNCXA6NJT0 531 aa20.62■□□□□ 0.89
TMEM260-203ENST00000539559 KCNU1A8MYU2 1149 aa20.62■□□□□ 0.89
TMEM260-203ENST00000539559 CLDN5O00501 218 aa20.62■□□□□ 0.89
TMEM260-203ENST00000539559 XPO1O14980 1071 aaKnown RBP20.62■□□□□ 0.89
TMEM260-203ENST00000539559 VAPBO95292 243 aa20.62■□□□□ 0.89
TMEM260-203ENST00000539559 ZNF286BP0CG31 522 aa20.62■□□□□ 0.89
TMEM260-203ENST00000539559 CDK4P11802 303 aa20.62■□□□□ 0.89
TMEM260-203ENST00000539559 TKTP29401 623 aaKnown RBP20.62■□□□□ 0.89
TMEM260-203ENST00000539559 RPL26P61254 145 aaKnown RBP20.62■□□□□ 0.89
TMEM260-203ENST00000539559 HPCAP84074 193 aa20.62■□□□□ 0.89
TMEM260-203ENST00000539559 BST2Q10589 180 aaKnown RBP20.62■□□□□ 0.89
TMEM260-203ENST00000539559 CTU1Q7Z7A3 348 aaKnown RBP20.62■□□□□ 0.89
TMEM260-203ENST00000539559 LSMEM2Q8N112 164 aa20.62■□□□□ 0.89
TMEM260-203ENST00000539559 AHI1Q8N157 1196 aa20.62■□□□□ 0.89
TMEM260-203ENST00000539559 RNF169Q8NCN4 708 aa20.62■□□□□ 0.89
TMEM260-203ENST00000539559 SHCBP1Q8NEM2 672 aa20.62■□□□□ 0.89
TMEM260-203ENST00000539559 ANLNQ9NQW6 1124 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms