RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 BSPRYQ5W0U4 402 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 TERB1Q8NA31 727 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 CDHR1Q96JP9 859 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 AGAP3Q96P47 875 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 CORO1BQ9BR76 489 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 UNC93B1Q9H1C4 597 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 DHX35Q9H5Z1 703 aaKnown RBP18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 NOL11Q9H8H0 719 aaKnown RBP18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 CXorf21Q9HAI6 301 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 PALMDQ9NP74 551 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 HTR3EA5X5Y0 456 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 TRIM64A6NGJ6 449 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 H3BMQ9 156 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 GIPC1O14908 333 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 ZBTB11O95625 1053 aaPredicted RBP18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 APOA4P06727 396 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 ASNSP08243 561 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 SDC4P31431 198 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 GRIA4P48058 902 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 PRKAA2P54646 552 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 STRA8Q7Z7C7 330 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 CENPSQ8N2Z9 138 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 COLGALT1Q8NBJ5 622 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 MARK4Q96L34 752 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 COG8Q96MW5 612 aa18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 MAFBQ9Y5Q3 323 aaPredicted RBP18.9■□□□□ 0.62
SFSWAP-207ENST00000538548 PAPSS1O43252 624 aaPredicted RBP18.89■□□□□ 0.62
SFSWAP-207ENST00000538548 FUCA1P04066 466 aa18.89■□□□□ 0.62
SFSWAP-207ENST00000538548 VDRP11473 427 aa18.89■□□□□ 0.62
SFSWAP-207ENST00000538548 PRAMEP78395 509 aa18.89■□□□□ 0.62
SFSWAP-207ENST00000538548 HMBOX1Q6NT76 420 aa18.89■□□□□ 0.62
SFSWAP-207ENST00000538548 TTC33Q6PID6 262 aaPredicted RBP18.89■□□□□ 0.62
SFSWAP-207ENST00000538548 ZNF786Q8N393 782 aa18.89■□□□□ 0.62
SFSWAP-207ENST00000538548 ANKFN1Q8N957 763 aa18.89■□□□□ 0.62
SFSWAP-207ENST00000538548 RDH11Q8TC12 318 aa18.89■□□□□ 0.62
SFSWAP-207ENST00000538548 URGCPQ8TCY9 931 aa18.89■□□□□ 0.62
SFSWAP-207ENST00000538548 CHPT1Q8WUD6 406 aa18.89■□□□□ 0.62
SFSWAP-207ENST00000538548 LPAR1Q92633 364 aa18.89■□□□□ 0.62
SFSWAP-207ENST00000538548 IL22Q9GZX6 179 aa18.89■□□□□ 0.62
SFSWAP-207ENST00000538548 ZDHHC2Q9UIJ5 367 aa18.89■□□□□ 0.62
SFSWAP-207ENST00000538548 CTDP1Q9Y5B0 961 aaPredicted RBP18.89■□□□□ 0.62
SFSWAP-207ENST00000538548 COL4A5P29400 1685 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 E7ENX8 843 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 K7EPI3 171 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 B4GALT4O60513 344 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 C2P06681 752 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 DCKP27707 260 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 EFNA5P52803 228 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 DLG2Q15700 870 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 DPYSL2Q16555 572 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 KIZQ2M2Z5 673 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 C16orf87Q6PH81 154 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 CES3Q6UWW8 571 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 ZYG11AQ6WRX3 759 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 CHSY3Q70JA7 882 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 LPGAT1Q92604 370 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 PBXIP1Q96AQ6 731 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 MOCOSQ96EN8 888 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 NEURL2Q9BR09 285 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 GPATCH1Q9BRR8 931 aaKnown RBP18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 ACE2Q9BYF1 805 aaPredicted RBP18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 ZNF302Q9NR11 478 aa18.89■□□□□ 0.61
SFSWAP-207ENST00000538548 TMX2-CTNND1H3BSU7 103 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 AKAP10O43572 662 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 ADAM23O75077 832 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 STAMBPO95630 424 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 UGT1A6P19224 532 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 UGT1A1P22309 533 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 UGT1A4P22310 534 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 RPL10P27635 214 aaKnown RBP18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 UGT1A3P35503 534 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 UGT1A5P35504 534 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 CCR10P46092 362 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 IRAK1BP1Q5VVH5 260 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 NANOGP8Q6NSW7 305 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 PCDH20Q8N6Y1 951 aaKnown RBP18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 PPWD1Q96BP3 646 aaKnown RBP18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 HEXIM2Q96MH2 286 aaKnown RBP18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 MPHOSPH6Q99547 160 aaKnown RBP18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 NPLQ9BXD5 320 aaPredicted RBP18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 BRD8Q9H0E9 1235 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 GBA2Q9HCG7 927 aaPredicted RBP18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 DTLQ9NZJ0 730 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 CNOT6Q9ULM6 557 aaKnown RBP18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 TMED5Q9Y3A6 229 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 HEATR9A2RTY3 570 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 TRIM24O15164 1050 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 JUNP05412 331 aaKnown RBP18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 BMP2P12643 396 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 CKMT2P17540 419 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 PPIL2Q13356 520 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 NIPAL1Q6NVV3 410 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 DPH6Q7L8W6 267 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 PPP1R10Q96QC0 940 aaKnown RBP18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 CAB39LQ9H9S4 337 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 HACD3Q9P035 362 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 AFG3L2Q9Y4W6 797 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 CNTNAP1P78357 1384 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 FER1L6Q2WGJ9 1857 aa18.88■□□□□ 0.61
SFSWAP-207ENST00000538548 TRIM64BA6NI03 449 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms