RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ULK2Q8IYT8 1036 aa25.33■■□□□ 1.65
RAB40C-204ENST00000538492 ZNF781Q8N8C0 355 aa25.33■■□□□ 1.65
RAB40C-204ENST00000538492 FCRL2Q96LA5 508 aaPredicted RBP25.33■■□□□ 1.65
RAB40C-204ENST00000538492 FAM167BQ9BTA0 163 aa25.33■■□□□ 1.65
RAB40C-204ENST00000538492 SLC39A8Q9C0K1 460 aa25.33■■□□□ 1.65
RAB40C-204ENST00000538492 PTPRDP23468 1912 aa25.33■■□□□ 1.65
RAB40C-204ENST00000538492 TBX10O75333 385 aa25.33■■□□□ 1.64
RAB40C-204ENST00000538492 EIF4EBP2Q13542 120 aaPredicted RBP25.33■■□□□ 1.64
RAB40C-204ENST00000538492 SPATA2LQ8IUW3 424 aaPredicted RBP25.33■■□□□ 1.64
RAB40C-204ENST00000538492 THEM5Q8N1Q8 247 aa25.33■■□□□ 1.64
RAB40C-204ENST00000538492 MAB21L3Q8N8X9 362 aa25.33■■□□□ 1.64
RAB40C-204ENST00000538492 MCMBPQ9BTE3 642 aa25.33■■□□□ 1.64
RAB40C-204ENST00000538492 STN1Q9H668 368 aaKnown RBP25.33■■□□□ 1.64
RAB40C-204ENST00000538492 ABCC13Q9NSE7 274 aa25.33■■□□□ 1.64
RAB40C-204ENST00000538492 DSEQ9UL01 958 aa25.33■■□□□ 1.64
RAB40C-204ENST00000538492 NLRC5Q86WI3 1866 aa25.33■■□□□ 1.64
RAB40C-204ENST00000538492 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.32■■□□□ 1.64
RAB40C-204ENST00000538492 TM7SF2O76062 418 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 HSPA4LO95757 839 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 CCNCP24863 283 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 AVPR1AP37288 418 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 CSE1LP55060 971 aaKnown RBP25.32■■□□□ 1.64
RAB40C-204ENST00000538492 LINC00523Q86TU6 105 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 OR6Y1Q8NGX8 325 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 TBL1YQ9BQ87 522 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 KIFC1Q9BW19 673 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 AAR2Q9Y312 384 aaKnown RBP25.32■■□□□ 1.64
RAB40C-204ENST00000538492 PHGDHO43175 533 aaKnown RBP25.32■■□□□ 1.64
RAB40C-204ENST00000538492 MAFKO60675 156 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 NCF2P19878 526 aaPredicted RBP25.32■■□□□ 1.64
RAB40C-204ENST00000538492 MFSD14CQ5VZR4 134 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 NRG4Q8WWG1 115 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 TSGA13Q96PP4 275 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 MAN1C1Q9NR34 630 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 DNAJC28Q9NX36 388 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 MPP6Q9NZW5 540 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 SORCS3Q9UPU3 1222 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 PCDHB12Q9Y5F1 795 aa25.32■■□□□ 1.64
RAB40C-204ENST00000538492 CCR1P32246 355 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 SLC25A3Q00325 362 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 DSC3Q14574 896 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 DNAL1Q4LDG9 190 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 SNX30Q5VWJ9 437 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 PDPK2PQ6A1A2 396 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 SCN4BQ8IWT1 228 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 SCML4Q8N228 414 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 FICDQ9BVA6 458 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 TASP1Q9H6P5 420 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 SLC7A8Q9UHI5 535 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 COL4A4P53420 1690 aaPredicted RBP25.31■■□□□ 1.64
RAB40C-204ENST00000538492 TK2O00142 265 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 CYP2C18P33260 490 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 KCNA10Q16322 511 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 MUM1Q2TAK8 710 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 SCD5Q86SK9 330 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 ZC3HC1Q86WB0 502 aaKnown RBP25.31■■□□□ 1.64
RAB40C-204ENST00000538492 HAPLN3Q96S86 360 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 ATXN3LQ9H3M9 355 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 NMUR1Q9HB89 426 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 NMRK1Q9NWW6 199 aa25.31■■□□□ 1.64
RAB40C-204ENST00000538492 GLRBP48167 497 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 ITGA7Q13683 1181 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 DENND6AQ8IWF6 608 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 SHKBP1Q8TBC3 707 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 ANKRD27Q96NW4 1050 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 PANX3Q96QZ0 392 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 TRIM62Q9BVG3 475 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 UPF3AQ9H1J1 476 aaKnown RBP25.3■■□□□ 1.64
RAB40C-204ENST00000538492 COG4Q9H9E3 785 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 GLOD4Q9HC38 313 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 TRMT13Q9NUP7 481 aaKnown RBP25.3■■□□□ 1.64
RAB40C-204ENST00000538492 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.3■■□□□ 1.64
RAB40C-204ENST00000538492 CACNG3O60359 315 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 PMPCBO75439 489 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 KLHL2O95198 593 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 VAPBO95292 243 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 GABRB3P28472 473 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 CPOXP36551 454 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 SLC34A1Q06495 639 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 CTBP1Q13363 440 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 USP10Q14694 798 aaKnown RBP25.3■■□□□ 1.64
RAB40C-204ENST00000538492 MAPRE1Q15691 268 aaKnown RBP25.3■■□□□ 1.64
RAB40C-204ENST00000538492 ANO4Q32M45 955 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 CFAP157Q5JU67 520 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 BRMS1LQ5PSV4 323 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 SDHAF4Q5VUM1 108 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 RIPOR1Q6ZS17 1223 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 SUSD3Q96L08 255 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 GPR22Q99680 433 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 SMOC2Q9H3U7 446 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 TLK1Q9UKI8 766 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 WASF2Q9Y6W5 498 aa25.3■■□□□ 1.64
RAB40C-204ENST00000538492 TNFRSF10BO14763 440 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 AHSGP02765 367 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 ALOX15P16050 662 aaPredicted RBP25.29■■□□□ 1.64
RAB40C-204ENST00000538492 TUBP50607 506 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 YWHAHQ04917 246 aaPredicted RBP25.29■■□□□ 1.64
RAB40C-204ENST00000538492 ZNF33AQ06730 810 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 SLC39A12Q504Y0 691 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 PCID2Q5JVF3 399 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms