RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 NAPRTQ6XQN6 538 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 SPOCD1Q6ZMY3 1216 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 PLEKHG7Q6ZR37 379 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 OTOP3Q7RTS5 596 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 ZNF720Q7Z2F6 126 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 TMEM126BQ8IUX1 230 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 PARP8Q8N3A8 854 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 CBR4Q8N4T8 237 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 KYQ8NBH2 561 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 PMEPA1Q969W9 287 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 ZNF347Q96SE7 839 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 SH2D3AQ9BRG2 576 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 RIOX1Q9H6W3 641 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 WDR41Q9HAD4 459 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 HMX1Q9NP08 348 aaPredicted RBP10.87□□□□□ -0.67
RTN3-208ENST00000537981 COQ3Q9NZJ6 369 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 CRNNQ9UBG3 495 aaPredicted RBP10.87□□□□□ -0.67
RTN3-208ENST00000537981 ZNF229Q9UJW7 825 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 CNOT6Q9ULM6 557 aaKnown RBP10.87□□□□□ -0.67
RTN3-208ENST00000537981 TMEM238LA0A1B0GVL6 79 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 A8MV72 311 aaPredicted RBP10.87□□□□□ -0.67
RTN3-208ENST00000537981 CLDN25C9JDP6 229 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 H3BUI4 141 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 PSTPIP1O43586 416 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 CHMP2AO43633 222 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 NUAK1O60285 661 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 TPST1O60507 370 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 VAPBO95292 243 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 JUNP05412 331 aaKnown RBP10.87□□□□□ -0.67
RTN3-208ENST00000537981 TMEM191BP0C7N4 346 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 POLR2EP19388 210 aaKnown RBP10.87□□□□□ -0.67
RTN3-208ENST00000537981 OSBPP22059 807 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 ME2P23368 584 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 OGDHQ02218 1023 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 PRKCQQ04759 706 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 CHRNEQ04844 493 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 PIGFQ07326 219 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 TMEM95Q3KNT9 176 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 CEP55Q53EZ4 464 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 PPM1JQ5JR12 505 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 PITRM1Q5JRX3 1037 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 KCNT1Q5JUK3 1230 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 PLA2G4FQ68DD2 849 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 IQSEC1Q6DN90 963 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 ELMOD2Q8IZ81 293 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 PDIK1LQ8N165 341 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 CHCHD4Q8N4Q1 142 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 LSMEM1Q8N8F7 131 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 CYGBQ8WWM9 190 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 RPL10LQ96L21 214 aaKnown RBP10.87□□□□□ -0.67
RTN3-208ENST00000537981 LHPPQ9H008 270 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 AKIP1Q9NQ31 210 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 ADPRHL2Q9NX46 363 aa10.87□□□□□ -0.67
RTN3-208ENST00000537981 WRAP73Q9P2S5 460 aaPredicted RBP10.87□□□□□ -0.67
RTN3-208ENST00000537981 hCG_1818297A0A087WSY0 165 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 GOLGA8CPA6NN73 597 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 MAN1A2O60476 641 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 ITGBL1O95965 494 aaPredicted RBP10.86□□□□□ -0.67
RTN3-208ENST00000537981 MYCP01106 439 aaPredicted RBP10.86□□□□□ -0.67
RTN3-208ENST00000537981 BMP4P12644 408 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 ELK4P28324 431 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 WEE1P30291 646 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 GTF2IP78347 998 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 ECT2LQ008S8 904 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 MAMLD1Q13495 774 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 CATSPEREQ5SY80 951 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 SPATC1Q76KD6 591 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 KRT77Q7Z794 578 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 CCDC60Q8IWA6 550 aaPredicted RBP10.86□□□□□ -0.67
RTN3-208ENST00000537981 SLC22A15Q8IZD6 547 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 TNS4Q8IZW8 715 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 CMASQ8NFW8 434 aaPredicted RBP10.86□□□□□ -0.67
RTN3-208ENST00000537981 OR13F1Q8NGS4 319 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 TRIB2Q92519 343 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 PPWD1Q96BP3 646 aaKnown RBP10.86□□□□□ -0.67
RTN3-208ENST00000537981 C1orf50Q9BV19 199 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 JMJD4Q9H9V9 463 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 SNTG2Q9NY99 539 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 CNOT11Q9UKZ1 510 aaKnown RBP10.86□□□□□ -0.67
RTN3-208ENST00000537981 DDX60LQ5H9U9 1706 aaKnown RBP10.86□□□□□ -0.67
RTN3-208ENST00000537981 SHANK3Q9BYB0 1731 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 ZNF839A8K0R7 811 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 FAM155AB1AL88 458 aaPredicted RBP10.86□□□□□ -0.67
RTN3-208ENST00000537981 FAM86B1E9PN63 330 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 TLR3O15455 904 aaKnown RBP10.86□□□□□ -0.67
RTN3-208ENST00000537981 TSPAN6O43657 245 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 ITGAVP06756 1048 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 SLURP2P0DP57 97 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 SNAP25P60880 206 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 CDK18Q07002 472 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 FSTL1Q12841 308 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 ARHGEF6Q15052 776 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 CRTC2Q53ET0 693 aaPredicted RBP10.86□□□□□ -0.67
RTN3-208ENST00000537981 MON1BQ7L1V2 547 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 FAM178BQ8IXR5 827 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 TTLL6Q8N841 843 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.86□□□□□ -0.67
RTN3-208ENST00000537981 NEDD1Q8NHV4 660 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 SLC35B2Q8TB61 432 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 TAS1R2Q8TE23 839 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms