RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 KIF12Q96FN5 646 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 PKP2Q99959 881 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 MCMBPQ9BTE3 642 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 ACE2Q9BYF1 805 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-218ENST00000537641 B3GNT5Q9BYG0 378 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 ZBTB26Q9HCK0 441 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 FAM49BQ9NUQ9 324 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 UTP6Q9NYH9 597 aaKnown RBP12.37□□□□□ -0.43
CPSF7-218ENST00000537641 EPS15L1Q9UBC2 864 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 SLC45A1Q9Y2W3 748 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 ZNF236Q9UL36 1845 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 FNDC1Q4ZHG4 1894 aaPredicted RBP12.36□□□□□ -0.43
CPSF7-218ENST00000537641 A0A087WZ62 844 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 ZCWPW2A0A1B0GU75 182 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 UNCXA6NJT0 531 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 VAPBO95292 243 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 PIGNO95427 931 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 LTFP02788 710 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 C8BP07358 591 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 ENO3P13929 434 aaPredicted RBP12.36□□□□□ -0.43
CPSF7-218ENST00000537641 PSMC3P17980 439 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 GRM5P41594 1212 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 SULT1E1P49888 294 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 TXNL4AP83876 142 aaKnown RBP12.36□□□□□ -0.43
CPSF7-218ENST00000537641 IRF9Q00978 393 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 ART3Q13508 389 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 IRAK1BP1Q5VVH5 260 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 CES3Q6UWW8 571 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 MAMDC4Q6UXC1 1216 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 LRRC52Q8N7C0 313 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 ANKRD52Q8NB46 1076 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 OR52K1Q8NGK4 314 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 RNF139Q8WU17 664 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 HSFY1Q96LI6 401 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 PRPF18Q99633 342 aaKnown RBP12.36□□□□□ -0.43
CPSF7-218ENST00000537641 GPR22Q99680 433 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 FDXACB1Q9BRP7 624 aaPredicted RBP12.36□□□□□ -0.43
CPSF7-218ENST00000537641 DNAI2Q9GZS0 605 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 PREBQ9HCU5 417 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 PIH1D1Q9NWS0 290 aaKnown RBP12.36□□□□□ -0.43
CPSF7-218ENST00000537641 GALNT8Q9NY28 637 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 SUCOQ9UBS9 1254 aaKnown RBP12.36□□□□□ -0.43
CPSF7-218ENST00000537641 APPL1Q9UKG1 709 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 VANGL2Q9ULK5 521 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 AKT3Q9Y243 479 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 SNX9Q9Y5X1 595 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 NR2E3Q9Y5X4 410 aa12.36□□□□□ -0.43
CPSF7-218ENST00000537641 AP3B1O00203 1094 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 NEMP1O14524 444 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 ACOT8O14734 319 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 HNRNPRO43390 633 aaKnown RBP12.35□□□□□ -0.43
CPSF7-218ENST00000537641 CHRNGP07510 517 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 HSPA1AP0DMV8 641 aaKnown RBP12.35□□□□□ -0.43
CPSF7-218ENST00000537641 HSPA1BP0DMV9 641 aaKnown RBP12.35□□□□□ -0.43
CPSF7-218ENST00000537641 COL6A2P12110 1019 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 ZNF23P17027 643 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 ARF4P18085 180 aaPredicted RBP12.35□□□□□ -0.43
CPSF7-218ENST00000537641 DNAJB2P25686 324 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 GMPRP36959 345 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 MATKP42679 507 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 GRIA4P48058 902 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 NPY2RP49146 381 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 INHBCP55103 352 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 CDKL1Q00532 357 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 SULT2A1Q06520 285 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 SLC25A52Q3SY17 297 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 GJC2Q5T442 439 aaPredicted RBP12.35□□□□□ -0.43
CPSF7-218ENST00000537641 PDZD4Q76G19 769 aaPredicted RBP12.35□□□□□ -0.43
CPSF7-218ENST00000537641 KCNMB4Q86W47 210 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 PYROXD2Q8N2H3 581 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 RIN3Q8TB24 985 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 CLEC4CQ8WTT0 213 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 DUS3LQ96G46 650 aaKnown RBP12.35□□□□□ -0.43
CPSF7-218ENST00000537641 CPB2Q96IY4 423 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 VPS39Q96JC1 886 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 MRPL1Q9BYD6 325 aaKnown RBP12.35□□□□□ -0.43
CPSF7-218ENST00000537641 MAGEB5Q9BZ81 275 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 PRDM12Q9H4Q4 367 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 WDR55Q9H6Y2 383 aaPredicted RBP12.35□□□□□ -0.43
CPSF7-218ENST00000537641 CHCHD3Q9NX63 227 aaKnown RBP12.35□□□□□ -0.43
CPSF7-218ENST00000537641 SEPT10Q9P0V9 454 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 KLHL8Q9P2G9 620 aaPredicted RBP12.35□□□□□ -0.43
CPSF7-218ENST00000537641 PACSIN3Q9UKS6 424 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 NME7Q9Y5B8 376 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 SQORQ9Y6N5 450 aa12.35□□□□□ -0.43
CPSF7-218ENST00000537641 PDCD11Q14690 1871 aaKnown RBP12.34□□□□□ -0.43
CPSF7-218ENST00000537641 E2F8A0AVK6 867 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 NPHS1O60500 1241 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 DDHD2O94830 711 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 ATP6V1B1P15313 513 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 YBX3P16989 372 aaKnown RBP eCLIP12.34□□□□□ -0.437e-7■□□□□ 11.1
CPSF7-218ENST00000537641 EPHA3P29320 983 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 DPP6P42658 865 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 ALDH3B2P48448 385 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 POLD2P49005 469 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 MS4A2Q01362 244 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 DCTN2Q13561 401 aaKnown RBP12.34□□□□□ -0.43
CPSF7-218ENST00000537641 PPP2R5DQ14738 602 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 MAPRE2Q15555 327 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 KIZQ2M2Z5 673 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms