RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 SERPINB6P35237 376 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 PGGT1BP53609 377 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 ITGA7Q13683 1181 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 ANO4Q32M45 955 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 FOXB2Q5VYV0 432 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 PDSS2Q86YH6 399 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 PPP1R36Q96LQ0 422 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 VAT1Q99536 393 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 APBA2Q99767 749 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 EPAS1Q99814 870 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 RTKNQ9BST9 563 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 ACE2Q9BYF1 805 aaPredicted RBP14.58□□□□□ -0.08
USP44-203ENST00000537435 TKTL2Q9H0I9 626 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 WDR55Q9H6Y2 383 aaPredicted RBP14.58□□□□□ -0.08
USP44-203ENST00000537435 MID2Q9UJV3 735 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 GNEQ9Y223 722 aaKnown RBP14.58□□□□□ -0.08
USP44-203ENST00000537435 SSX2IPQ9Y2D8 614 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 MEIS3P2A8K0S8 358 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 NEMP1O14524 444 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 AHCYL1O43865 530 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 LRIG2O94898 1065 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 FAM163BP0C2L3 166 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 CD1EP15812 388 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 SERPINB5P36952 375 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 CCR10P46092 362 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 PSEN2P49810 448 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 CDH17Q12864 832 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 SFT2D3Q587I9 215 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 THEMIS2Q5TEJ8 643 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 PLEKHH3Q7Z736 793 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 SPDYE1Q8NFV5 336 aaPredicted RBP14.57□□□□□ -0.08
USP44-203ENST00000537435 USP33Q8TEY7 942 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 BRI3BPQ8WY22 251 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 TUBGCP5Q96RT8 1024 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 GPR22Q99680 433 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 TSPYL2Q9H2G4 693 aaPredicted RBP14.57□□□□□ -0.08
USP44-203ENST00000537435 SPATS2LQ9NUQ6 558 aaKnown RBP14.57□□□□□ -0.08
USP44-203ENST00000537435 TLK1Q9UKI8 766 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 PHGDHO43175 533 aaKnown RBP14.57□□□□□ -0.08
USP44-203ENST00000537435 GNAT1P11488 350 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 NUMBP49757 651 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 CRYBB1P53674 252 aaPredicted RBP14.57□□□□□ -0.08
USP44-203ENST00000537435 MTTPP55157 894 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 HNRNPDQ14103 355 aaKnown RBP14.57□□□□□ -0.08
USP44-203ENST00000537435 RAB41Q5JT25 222 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 NAPEPLDQ6IQ20 393 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 ZYG11AQ6WRX3 759 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 OTOP3Q7RTS5 596 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 TLK2Q86UE8 772 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 ZC3HC1Q86WB0 502 aaKnown RBP14.57□□□□□ -0.08
USP44-203ENST00000537435 GDPD5Q8WTR4 605 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 TRAPPC9Q96Q05 1148 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 C1QTNF1Q9BXJ1 281 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 ZNF408Q9H9D4 720 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 SLC45A1Q9Y2W3 748 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 RAP2CQ9Y3L5 183 aa14.57□□□□□ -0.08
USP44-203ENST00000537435 EME2A4GXA9 379 aaPredicted RBP14.56□□□□□ -0.08
USP44-203ENST00000537435 MATN2O00339 956 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 RNASEH1O60930 286 aaKnown RBP14.56□□□□□ -0.08
USP44-203ENST00000537435 F9P00740 461 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 APOA4P06727 396 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 SBK3P0C264 359 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 RAG1P15918 1043 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 PIK3R1P27986 724 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 PEX2P28328 305 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 AVPR1AP37288 418 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 GRIA4P48058 902 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 CSRP3P50461 194 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 PRPSAP1Q14558 356 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 USP10Q14694 798 aaKnown RBP14.56□□□□□ -0.08
USP44-203ENST00000537435 LIPMQ5VYY2 423 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 BHLHA9Q7RTU4 235 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 TMEM151AQ8N4L1 468 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 ZSCAN18Q8TBC5 510 aaPredicted RBP14.56□□□□□ -0.08
USP44-203ENST00000537435 TSNARE1Q96NA8 513 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 KLHL4Q9C0H6 718 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 DRC3Q9H069 523 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 VCX3BQ9H321 246 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 ZDHHC7Q9NXF8 308 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 PACSIN3Q9UKS6 424 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 G3BP2Q9UN86 482 aaKnown RBP14.56□□□□□ -0.08
USP44-203ENST00000537435 HHLA1C9JL84 531 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 AIM2O14862 343 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 HDAC3O15379 428 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 PIGNO95427 931 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 GLRBP48167 497 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 LHX1P48742 406 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 RPL14P50914 215 aaKnown RBP14.56□□□□□ -0.08
USP44-203ENST00000537435 LSM12Q3MHD2 195 aaKnown RBP14.56□□□□□ -0.08
USP44-203ENST00000537435 SEL1L3Q68CR1 1132 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 CNTD1Q8N815 330 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 KCTD4Q8WVF5 259 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 DPF3Q92784 378 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 SCYL1Q96KG9 808 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 KIFC1Q9BW19 673 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 RHOJQ9H4E5 214 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 RRN3Q9NYV6 651 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 ANKRD6Q9Y2G4 727 aa14.56□□□□□ -0.08
USP44-203ENST00000537435 MYL3P08590 195 aa14.55□□□□□ -0.08
USP44-203ENST00000537435 THRAP10827 490 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms