RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 TMEM121Q9BTD3 319 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 MECRQ9BV79 373 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 DNAI2Q9GZS0 605 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 SEMA6AQ9H2E6 1030 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 UBE2TQ9NPD8 197 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 SYBUQ9NX95 663 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 ARPC4-TTLL3A0A0A6YYG9 625 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 TRIM49D1C9J1S8 452 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 SGK1O00141 431 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 AURKAO14965 403 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 CLIC2O15247 247 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 ACOX3O15254 700 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 GCATO75600 419 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 HOXC6P09630 235 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 EPHA3P29320 983 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 FAAP100Q0VG06 881 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 SKIV2LQ15477 1246 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 UBE2UQ5VVX9 321 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 IDO2Q6ZQW0 420 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 CPNE9Q8IYJ1 553 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 COLGALT2Q8IYK4 626 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 FBXO36Q8NEA4 188 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 SH3YL1Q96HL8 342 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 ZFYVE19Q96K21 471 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 NACC1Q96RE7 527 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 DHX33Q9H6R0 707 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 SP140LQ9H930 580 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 IL17RBQ9NRM6 502 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 MAP3K20Q9NYL2 800 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 PLLPQ9Y342 182 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 SNX13Q9Y5W8 968 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 FOXN3O00409 490 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 RAD51BO15315 384 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 NTRK1P04629 796 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 OPRL1P41146 370 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 TAGLNQ01995 201 aaKnown RBP11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 KRR1Q13601 381 aaKnown RBP11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 CCDC103Q8IW40 242 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 GRIN3AQ8TCU5 1115 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 AFG1LQ8WV93 481 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 GJA10Q969M2 543 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 PBXIP1Q96AQ6 731 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 SPATA33Q96N06 139 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 SLC13A1Q9BZW2 595 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 FANCEQ9HB96 536 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 DNAJC28Q9NX36 388 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 CNTN3Q9P232 1028 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 NXF1Q9UBU9 619 aaKnown RBP11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 SIPA1L3O60292 1781 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 PRSS51A0A1B0GVH4 220 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 TMX2-CTNND1H3BSU7 103 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 TRIM16O95361 564 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 CES1P23141 567 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 LAMC2Q13753 1193 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 INSCQ1MX18 579 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 KCNK18Q7Z418 384 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 HORMAD1Q86X24 394 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 SERAC1Q96JX3 654 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 FGFBP2Q9BYJ0 223 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 XPNPEP1Q9NQW7 623 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 ZC4H2Q9NQZ6 224 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 RAB20Q9NX57 234 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 TESMINQ9Y4I5 508 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 BAZ2BQ9UIF8 2168 aaKnown RBP11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 B3GALNT1O75752 331 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 ARHGEF15O94989 841 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 NR3C2P08235 984 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 SLC9A3P48764 834 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 PRKAA2P54646 552 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 NME5P56597 212 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 GRSF1Q12849 480 aaKnown RBP eCLIP11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 ABRAXAS1Q6UWZ7 409 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 FRMD7Q6ZUT3 714 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 OSTM1Q86WC4 334 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 RHOT1Q8IXI2 618 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 PPIL6Q8IXY8 311 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 ABRAQ8N0Z2 381 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 DHRS4Q9BTZ2 278 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 C8orf4Q9NR00 106 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 C20orf96Q9NUD7 363 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 PACSIN3Q9UKS6 424 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 QSER1Q2KHR3 1735 aa11.05□□□□□ -0.64
CLSTN3-207ENST00000537408 DENND3A2RUS2 1198 aa11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 CENPXA8MT69 81 aa11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 RNF103O00237 685 aa11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 HTRA2O43464 458 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 ZMPSTE24O75844 475 aa11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 ZNF26P17031 533 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 RRM2P31350 389 aa11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 ATXN3P54252 364 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 C19orf57Q0VDD7 668 aa11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 TRIM32Q13049 653 aa11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 KRT39Q6A163 491 aa11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 XRRA1Q6P2D8 792 aa11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 SIMC1Q8NDZ2 872 aa11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 VPS37AQ8NEZ2 397 aa11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 ABHD11Q8NFV4 315 aa11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 LILRB1Q8NHL6 650 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 EGLN2Q96KS0 407 aa11.04□□□□□ -0.64
CLSTN3-207ENST00000537408 NFASCO94856 1347 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms