RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 LATS2Q9NRM7 1088 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 SPASTQ9UBP0 616 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 APOBEC3BQ9UH17 382 aaKnown RBP9.78□□□□□ -0.84
CPSF7-217ENST00000537162 PILRAQ9UKJ1 303 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 PCDHGA3Q9Y5H0 932 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 DIDO1Q9BTC0 2240 aaKnown RBP9.77□□□□□ -0.85
CPSF7-217ENST00000537162 CD99P14209 185 aa9.77□□□□□ -0.85
CPSF7-217ENST00000537162 ZNF131P52739 623 aa9.77□□□□□ -0.85
CPSF7-217ENST00000537162 ELAVL3Q14576 367 aaKnown RBP9.77□□□□□ -0.85
CPSF7-217ENST00000537162 TRIP4Q15650 581 aaPredicted RBP9.77□□□□□ -0.85
CPSF7-217ENST00000537162 KRT79Q5XKE5 535 aa9.77□□□□□ -0.85
CPSF7-217ENST00000537162 CEP135Q66GS9 1140 aa9.77□□□□□ -0.85
CPSF7-217ENST00000537162 KYAT3Q6YP21 454 aaKnown RBP9.77□□□□□ -0.85
CPSF7-217ENST00000537162 ACOT1Q86TX2 421 aa9.77□□□□□ -0.85
CPSF7-217ENST00000537162 CDH24Q86UP0 819 aa9.77□□□□□ -0.85
CPSF7-217ENST00000537162 DCP2Q8IU60 420 aaKnown RBP9.77□□□□□ -0.85
CPSF7-217ENST00000537162 KDM1BQ8NB78 822 aa9.77□□□□□ -0.85
CPSF7-217ENST00000537162 GLIS1Q8NBF1 620 aa9.77□□□□□ -0.85
CPSF7-217ENST00000537162 PCDH19Q8TAB3 1148 aa9.77□□□□□ -0.85
CPSF7-217ENST00000537162 NOC3LQ8WTT2 800 aaKnown RBP9.77□□□□□ -0.85
CPSF7-217ENST00000537162 ANKRD36BP1Q96IX9 119 aa9.77□□□□□ -0.85
CPSF7-217ENST00000537162 SRRTQ9BXP5 876 aaKnown RBP9.77□□□□□ -0.85
CPSF7-217ENST00000537162 SPRY4Q9C004 299 aa9.77□□□□□ -0.85
CPSF7-217ENST00000537162 SMYD3Q9H7B4 428 aa9.77□□□□□ -0.85
CPSF7-217ENST00000537162 RDH14Q9HBH5 336 aa9.77□□□□□ -0.85
CPSF7-217ENST00000537162 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.77□□□□□ -0.85
CPSF7-217ENST00000537162 MARCH2Q9P0N8 246 aa9.77□□□□□ -0.85
CPSF7-217ENST00000537162 STIM2Q9P246 746 aa9.77□□□□□ -0.85
CPSF7-217ENST00000537162 OAS3Q9Y6K5 1087 aaKnown RBP9.77□□□□□ -0.85
CPSF7-217ENST00000537162 PPP6R2O75170 966 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 FAM13AO94988 1023 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 ASLP04424 464 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 SRPRAP08240 638 aaKnown RBP9.76□□□□□ -0.85
CPSF7-217ENST00000537162 CLCN1P35523 988 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 DDIT3P35638 169 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 RECQLP46063 649 aaPredicted RBP9.76□□□□□ -0.85
CPSF7-217ENST00000537162 RNASE9P60153 205 aaKnown RBP9.76□□□□□ -0.85
CPSF7-217ENST00000537162 WDR72Q3MJ13 1102 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 TMEM259Q4ZIN3 620 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 PITRM1Q5JRX3 1037 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 JMJD6Q6NYC1 403 aaPredicted RBP9.76□□□□□ -0.85
CPSF7-217ENST00000537162 CLEC20AQ6ZU45 233 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 NYAP1Q6ZVC0 841 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 ZNF438Q7Z4V0 828 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 PRIMA1Q86XR5 153 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 PHACTR4Q8IZ21 702 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 APCDD1Q8J025 514 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 C12orf29Q8N999 325 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 FRS2Q8WU20 508 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 KIAA1143Q96AT1 154 aaPredicted RBP9.76□□□□□ -0.85
CPSF7-217ENST00000537162 SDCBP2Q9H190 292 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 ZHX3Q9H4I2 956 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 PCIF1Q9H4Z3 704 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 FAM49BQ9NUQ9 324 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 IPO11Q9UI26 975 aaKnown RBP9.76□□□□□ -0.85
CPSF7-217ENST00000537162 STOML2Q9UJZ1 356 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 ODF2LQ9ULJ1 636 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 HS3ST3A1Q9Y663 406 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 RTTNQ86VV8 2226 aa9.76□□□□□ -0.85
CPSF7-217ENST00000537162 ANKUB1A6NFN9 424 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 TMEM200CA6NKL6 621 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 LRRTM2O43300 516 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 CDKL5O76039 1030 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 PAK4O96013 591 aaPredicted RBP9.75□□□□□ -0.85
CPSF7-217ENST00000537162 RALAP11233 206 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 ADORA2BP29275 332 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 PTGER4P35408 488 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 COPB1P53618 953 aaKnown RBP9.75□□□□□ -0.85
CPSF7-217ENST00000537162 PMS2P54278 862 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 HDAC4P56524 1084 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 TNNC1P63316 161 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 ECT2LQ008S8 904 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 ERV3-1Q14264 604 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 PIK3R6Q5UE93 754 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 ZNF517Q6ZMY9 492 aaPredicted RBP9.75□□□□□ -0.85
CPSF7-217ENST00000537162 SPRED1Q7Z699 444 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 MFN1Q8IWA4 741 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 NLGN4XQ8N0W4 816 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 NLGN4YQ8NFZ3 816 aaPredicted RBP9.75□□□□□ -0.85
CPSF7-217ENST00000537162 SPATA3Q8NHX4 192 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 FIBINQ8TAL6 211 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 PLD4Q96BZ4 506 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 SNRNP40Q96DI7 357 aaKnown RBP9.75□□□□□ -0.85
CPSF7-217ENST00000537162 RNF31Q96EP0 1072 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 PRICKLE1Q96MT3 831 aaPredicted RBP9.75□□□□□ -0.85
CPSF7-217ENST00000537162 SPAG5Q96R06 1193 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 CBWD1Q9BRT8 395 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 INTS2Q9H0H0 1204 aaKnown RBP9.75□□□□□ -0.85
CPSF7-217ENST00000537162 PARVGQ9HBI0 331 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 ASF1BQ9NVP2 202 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 OCIAD1Q9NX40 245 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 CLIC5Q9NZA1 410 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 KCND2Q9NZV8 630 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 RCOR3Q9P2K3 495 aaPredicted RBP9.75□□□□□ -0.85
CPSF7-217ENST00000537162 HMGXB4Q9UGU5 601 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 R3HCC1Q9Y3T6 440 aaKnown RBP9.75□□□□□ -0.85
CPSF7-217ENST00000537162 TRPM6Q9BX84 2022 aa9.75□□□□□ -0.85
CPSF7-217ENST00000537162 MAP1AP78559 2803 aaPredicted RBP9.74□□□□□ -0.85
CPSF7-217ENST00000537162 LRP4O75096 1905 aa9.74□□□□□ -0.85
CPSF7-217ENST00000537162 CDC45O75419 566 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms