RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 HEATR9A2RTY3 570 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 DDTLA6NHG4 134 aaPredicted RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 LRRIQ4A6NIV6 560 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 TRIM64CA6NLI5 447 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 H3BNH8 94 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 DDX39AO00148 427 aaKnown RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 ZBTB39O15060 712 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 TLL1O43897 1013 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 GPC4O75487 556 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 USP1O94782 785 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 OATP04181 439 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 PYGLP06737 847 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 GPIP06744 558 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 SUPT20HL2P0C7V6 817 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 KITP10721 976 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 FGFR1P11362 822 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 FGF3P11487 239 aaPredicted RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 CDK4P11802 303 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 ETS1P14921 441 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 PEX2P28328 305 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 SSTR3P32745 418 aaPredicted RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 ICAM3P32942 547 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 CAP2P40123 477 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 PBX2P40425 430 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 SLC26A3P40879 764 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 CPA2P48052 419 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 CD151P48509 253 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 SERPINB10P48595 397 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 GLUD2P49448 558 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 NUDT2P50583 147 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 TKTL1P51854 596 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 CACNB3P54284 484 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 C21orf59P57076 290 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 DNAJB13P59910 316 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 STX1BP61266 288 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 DYNLT1P63172 113 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 RBP5P82980 135 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 SLC25A3Q00325 362 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 FPGSQ05932 587 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 PTPN11Q06124 597 aaPredicted RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 CACNB2Q08289 660 aaPredicted RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 TCP10Q12799 353 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 NFIAQ12857 509 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 IFRD2Q12894 506 aaPredicted RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 CBX3Q13185 183 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 TOP3AQ13472 1001 aaPredicted RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 PTK2BQ14289 1009 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 SQLEQ14534 574 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 EMC2Q15006 297 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 PCBP1Q15365 356 aaKnown RBP eCLIP5.92□□□□□ -1.46
CHD4-206ENST00000536999 TLR1Q15399 786 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 DPYSL2Q16555 572 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 ANO4Q32M45 955 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 TRIM60Q495X7 471 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 MSS51Q4VC12 460 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 TMTC4Q5T4D3 741 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 UBAP2Q5T6F2 1119 aaKnown RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 ANKRD22Q5VYY1 191 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 PPP4R4Q6NUP7 873 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 NIPAL1Q6NVV3 410 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 C16orf46Q6P387 395 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 LCLAT1Q6UWP7 414 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 ABRAXAS1Q6UWZ7 409 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 Q6ZNX1 250 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 ZBTB49Q6ZSB9 765 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 STRADAQ7RTN6 431 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 TTC7BQ86TV6 843 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 CAND1Q86VP6 1230 aaKnown RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 UNC93AQ86WB7 457 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 TRIM50Q86XT4 487 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 XYLT1Q86Y38 959 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 TICAM1Q8IUC6 712 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 SLC22A9Q8IVM8 553 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 ANKFN1Q8N957 763 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 SCAIQ8N9R8 606 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 TDRD5Q8NAT2 981 aaKnown RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 RAB2BQ8WUD1 216 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 TRUB1Q8WWH5 349 aaKnown RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 PRPF31Q8WWY3 499 aaKnown RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 ZNF516Q92618 1163 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 TSPAN17Q96FV3 270 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 AGBL1Q96MI9 1066 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 SPATA13Q96N96 652 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 QKIQ96PU8 341 aaKnown RBP eCLIP5.92□□□□□ -1.46
CHD4-206ENST00000536999 CDRT15Q96T59 188 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 SLC9A7Q96T83 725 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 DDX50Q9BQ39 737 aaKnown RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 HERPUD2Q9BSE4 406 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 PI4K2AQ9BTU6 479 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 NFKBIZQ9BYH8 718 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 PBX4Q9BYU1 374 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 BCO2Q9BYV7 579 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 WDR12Q9GZL7 423 aaKnown RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 RBM38Q9H0Z9 239 aaKnown RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 EPS8L2Q9H6S3 715 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 COG4Q9H9E3 785 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 RPF1Q9H9Y2 349 aaKnown RBP5.92□□□□□ -1.46
CHD4-206ENST00000536999 WDR41Q9HAD4 459 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 PLEKHA5Q9HAU0 1116 aa5.92□□□□□ -1.46
CHD4-206ENST00000536999 ZBTB26Q9HCK0 441 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms