RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ACBD5Q5T8D3 534 aaPredicted RBP20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 LRRC31Q6UY01 552 aa20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 SETD3Q86TU7 594 aaPredicted RBP20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 HNRNPLLQ8WVV9 542 aaKnown RBP20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 C18orf8Q96DM3 657 aa20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 PSMB7Q99436 277 aa20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 ANLNQ9NQW6 1124 aa20.17■□□□□ 0.82
TNFRSF1B-204ENST00000536782 I6L893 689 aaPredicted RBP20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 SNAP91O60641 907 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 MT-CO1P00395 513 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 JUPP14923 745 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 CYP11B1P15538 503 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 CHRNA3P32297 505 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 SCNN1AP37088 669 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 ACADVLP49748 655 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 CCDC15Q0P6D6 951 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 DRAP1Q14919 205 aaPredicted RBP20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 SLC25A52Q3SY17 297 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 MIIPQ5JXC2 388 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 FAM102AQ5T9C2 384 aaPredicted RBP20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 SFMBT2Q5VUG0 894 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 PDZD3Q86UT5 571 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 ERICH1Q86X53 443 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 ZNF683Q8IZ20 524 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 TMIEQ8NEW7 156 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 C1orf74Q96LT6 269 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 TBCBQ99426 244 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 TUBGCP2Q9BSJ2 902 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 SCUBE2Q9NQ36 999 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 VPS51Q9UID3 782 aa20.16■□□□□ 0.82
TNFRSF1B-204ENST00000536782 DRGXA6NNA5 263 aa20.15■□□□□ 0.82
TNFRSF1B-204ENST00000536782 KPNA3O00505 521 aaPredicted RBP20.15■□□□□ 0.82
TNFRSF1B-204ENST00000536782 RNGTTO60942 597 aaKnown RBP20.15■□□□□ 0.82
TNFRSF1B-204ENST00000536782 CTSLP07711 333 aa20.15■□□□□ 0.82
TNFRSF1B-204ENST00000536782 TAS2R38P59533 333 aa20.15■□□□□ 0.82
TNFRSF1B-204ENST00000536782 C6orf118Q5T5N4 469 aa20.15■□□□□ 0.82
TNFRSF1B-204ENST00000536782 PIP5KL1Q5T9C9 394 aa20.15■□□□□ 0.82
TNFRSF1B-204ENST00000536782 DPY19L2P1Q6NXN4 242 aa20.15■□□□□ 0.82
TNFRSF1B-204ENST00000536782 KANSL1Q7Z3B3 1105 aa20.15■□□□□ 0.82
TNFRSF1B-204ENST00000536782 XYLT1Q86Y38 959 aa20.15■□□□□ 0.82
TNFRSF1B-204ENST00000536782 DCAF4L2Q8NA75 395 aa20.15■□□□□ 0.82
TNFRSF1B-204ENST00000536782 OR2A12Q8NGT7 310 aa20.15■□□□□ 0.82
TNFRSF1B-204ENST00000536782 TSC1Q92574 1164 aa20.15■□□□□ 0.82
TNFRSF1B-204ENST00000536782 MPP6Q9NZW5 540 aa20.15■□□□□ 0.82
TNFRSF1B-204ENST00000536782 SNX10Q9Y5X0 201 aa20.15■□□□□ 0.82
TNFRSF1B-204ENST00000536782 PTPRQQ9UMZ3 2332 aa20.14■□□□□ 0.82
TNFRSF1B-204ENST00000536782 SHROOM3Q8TF72 1996 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 A0A0D9SEW6 157 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 K7ERQ8 282 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 PRNPP04156 253 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 RRM1P23921 792 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 ERCC5P28715 1186 aaPredicted RBP20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 CLCN6P51797 869 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 HSP90AA4PQ58FG1 418 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 KLHDC7AQ5VTJ3 777 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 TAF3Q5VWG9 929 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 NEK5Q6P3R8 708 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 TFAP2DQ7Z6R9 452 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 KLHDC7BQ96G42 594 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 DYRK4Q9NR20 520 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 TMPRSS4Q9NRS4 437 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 DACH1Q9UI36 760 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 CA5BQ9Y2D0 317 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 FHOD1Q9Y613 1164 aa20.14■□□□□ 0.81
TNFRSF1B-204ENST00000536782 IGLV3-10A0A075B6K4 115 aa20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 A0A1W2PQU0 124 aa20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 PES1O00541 588 aaKnown RBP20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 SMAD6O43541 496 aaKnown RBP20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 CKMT2P17540 419 aa20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 OR1E1P30953 314 aa20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 CLDN6P56747 220 aa20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 KCNMA1Q12791 1236 aa20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 ILKQ13418 452 aa20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 DPCR1Q3MIW9 517 aa20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 SOWAHCQ53LP3 525 aaPredicted RBP20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 LINGO4Q6UY18 593 aa20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 MSANTD4Q8NCY6 345 aa20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 ARRDC3Q96B67 414 aa20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 NXPE2Q96DL1 559 aa20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 CLSTN2Q9H4D0 955 aa20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 CHMP5Q9NZZ3 219 aa20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 TDRD6O60522 2096 aaKnown RBP20.13■□□□□ 0.81
TNFRSF1B-204ENST00000536782 FAM170AA1A519 330 aa20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 GOLGA8SH3BPF8 625 aa20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 SLC31A1O15431 190 aa20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 SRGAP2O75044 1071 aa20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 SDC3O75056 442 aa20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 LSM8O95777 96 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 THEGLP0DJG4 465 aa20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 PRLRP16471 622 aa20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 FLT3P36888 993 aa20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 RECQLP46063 649 aaPredicted RBP20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 HES3Q5TGS1 186 aa20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 C22orf39Q6P5X5 142 aa20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 FBXL19Q6PCT2 694 aa20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 HORMAD1Q86X24 394 aa20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 TMEM145Q8NBT3 493 aa20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 CHST14Q8NCH0 376 aa20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 KLK6Q92876 244 aa20.12■□□□□ 0.81
TNFRSF1B-204ENST00000536782 HAPLN3Q96S86 360 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms