RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 MINDY1Q8N5J2 469 aa18.41■□□□□ 0.54
CCDC61-201ENST00000536603 KDM1BQ8NB78 822 aa18.41■□□□□ 0.54
CCDC61-201ENST00000536603 CTNNBL1Q8WYA6 563 aaPredicted RBP18.41■□□□□ 0.54
CCDC61-201ENST00000536603 ANP32BQ92688 251 aaKnown RBP18.41■□□□□ 0.54
CCDC61-201ENST00000536603 PANX2Q96RD6 677 aa18.41■□□□□ 0.54
CCDC61-201ENST00000536603 PEBP4Q96S96 227 aa18.41■□□□□ 0.54
CCDC61-201ENST00000536603 PRDM16Q9HAZ2 1276 aa18.41■□□□□ 0.54
CCDC61-201ENST00000536603 GPATCH2LQ9NWQ4 482 aa18.41■□□□□ 0.54
CCDC61-201ENST00000536603 CTTNBP2NLQ9P2B4 639 aa18.41■□□□□ 0.54
CCDC61-201ENST00000536603 ANAPC7Q9UJX3 599 aa18.41■□□□□ 0.54
CCDC61-201ENST00000536603 CYP8B1Q9UNU6 501 aa18.41■□□□□ 0.54
CCDC61-201ENST00000536603 MSRB2Q9Y3D2 182 aa18.41■□□□□ 0.54
CCDC61-201ENST00000536603 PI4KAP42356 2102 aa18.41■□□□□ 0.54
CCDC61-201ENST00000536603 MUC22E2RYF6 1773 aaPredicted RBP18.4■□□□□ 0.54
CCDC61-201ENST00000536603 ILVBLA1L0T0 632 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 MYO1FO00160 1098 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 NDUFS2O75306 463 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 ZNF217O75362 1048 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 TRIM16O95361 564 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 EPHB2P29323 1055 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 NNMTP40261 264 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 KRT83P78385 493 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 HNRNPA1L2Q32P51 320 aaKnown RBP18.4■□□□□ 0.54
CCDC61-201ENST00000536603 PEAR1Q5VY43 1037 aaPredicted RBP18.4■□□□□ 0.54
CCDC61-201ENST00000536603 PIP4P1Q86T03 277 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 NLRP14Q86W24 1093 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 OR7D4Q8NG98 312 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 OR2T3Q8NH03 318 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 ZNF564Q8TBZ8 553 aaPredicted RBP18.4■□□□□ 0.54
CCDC61-201ENST00000536603 PSMB7Q99436 277 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 EPAS1Q99814 870 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 NCAPGQ9BPX3 1015 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 SPON2Q9BUD6 331 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 SNRNP25Q9BV90 132 aaKnown RBP18.4■□□□□ 0.54
CCDC61-201ENST00000536603 DHX35Q9H5Z1 703 aaKnown RBP18.4■□□□□ 0.54
CCDC61-201ENST00000536603 RETREG1Q9H6L5 497 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 NDFIP2Q9NV92 336 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 TMEM248Q9NWD8 314 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 IP6K2Q9UHH9 426 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 DNAI1Q9UI46 699 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 SLC25A13Q9UJS0 675 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 AP4E1Q9UPM8 1137 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 NEU3Q9UQ49 428 aa18.4■□□□□ 0.54
CCDC61-201ENST00000536603 CKAP5Q14008 2032 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 UPK3BL1B0FP48 263 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 UPK3BL2E5RIL1 263 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 ARHGAP33O14559 1287 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 SNAP91O60641 907 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 SIN3BO75182 1162 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 SYPP08247 313 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 PCK1P35558 622 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 GNA12Q03113 381 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 CA9Q16790 459 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 ZNF783Q6ZMS7 281 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 CACUL1Q86Y37 369 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 CHCHD4Q8N4Q1 142 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 OR2I1PQ8NGU4 316 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 PRCCQ92733 491 aaPredicted RBP18.39■□□□□ 0.53
CCDC61-201ENST00000536603 SIPA1Q96FS4 1042 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 HSPA12BQ96MM6 686 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 C2orf49Q9BVC5 232 aaPredicted RBP18.39■□□□□ 0.53
CCDC61-201ENST00000536603 LHX6Q9UPM6 363 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 PCDHB9Q9Y5E1 797 aa18.39■□□□□ 0.53
CCDC61-201ENST00000536603 IGHV1OR15-9A0A0B4J2B8 117 aa18.38■□□□□ 0.53
CCDC61-201ENST00000536603 TARSL2A2RTX5 802 aaKnown RBP18.38■□□□□ 0.53
CCDC61-201ENST00000536603 TMEM253P0C7T8 217 aa18.38■□□□□ 0.53
CCDC61-201ENST00000536603 ACADMP11310 421 aa18.38■□□□□ 0.53
CCDC61-201ENST00000536603 TCF4P15884 667 aa18.38■□□□□ 0.53
CCDC61-201ENST00000536603 MAPKAPK2P49137 400 aa18.38■□□□□ 0.53
CCDC61-201ENST00000536603 GSDMDP57764 484 aa18.38■□□□□ 0.53
CCDC61-201ENST00000536603 CCDC173Q0VFZ6 552 aa18.38■□□□□ 0.53
CCDC61-201ENST00000536603 ACCSLQ4AC99 568 aa18.38■□□□□ 0.53
CCDC61-201ENST00000536603 CYP4V2Q6ZWL3 525 aaPredicted RBP18.38■□□□□ 0.53
CCDC61-201ENST00000536603 NIPA2Q8N8Q9 360 aa18.38■□□□□ 0.53
CCDC61-201ENST00000536603 PTPRN2Q92932 1015 aa18.38■□□□□ 0.53
CCDC61-201ENST00000536603 CAPN10Q9HC96 672 aa18.38■□□□□ 0.53
CCDC61-201ENST00000536603 ATP13A1Q9HD20 1204 aa18.38■□□□□ 0.53
CCDC61-201ENST00000536603 CD93Q9NPY3 652 aa18.38■□□□□ 0.53
CCDC61-201ENST00000536603 UVRAGQ9P2Y5 699 aa18.38■□□□□ 0.53
CCDC61-201ENST00000536603 VPS51Q9UID3 782 aa18.38■□□□□ 0.53
CCDC61-201ENST00000536603 EDDM13A0A1B0GTR0 161 aa18.37■□□□□ 0.53
CCDC61-201ENST00000536603 CBX4O00257 560 aa18.37■□□□□ 0.53
CCDC61-201ENST00000536603 MT-CO1P00395 513 aa18.37■□□□□ 0.53
CCDC61-201ENST00000536603 HOXB3P14651 431 aaPredicted RBP18.37■□□□□ 0.53
CCDC61-201ENST00000536603 GLDCP23378 1020 aa18.37■□□□□ 0.53
CCDC61-201ENST00000536603 IL1R2P27930 398 aa18.37■□□□□ 0.53
CCDC61-201ENST00000536603 VASPP50552 380 aaPredicted RBP18.37■□□□□ 0.53
CCDC61-201ENST00000536603 TPI1P60174 286 aa18.37■□□□□ 0.53
CCDC61-201ENST00000536603 HNRNPDQ14103 355 aaKnown RBP18.37■□□□□ 0.53
CCDC61-201ENST00000536603 DLG2Q15700 870 aa18.37■□□□□ 0.53
CCDC61-201ENST00000536603 KCNT1Q5JUK3 1230 aa18.37■□□□□ 0.53
CCDC61-201ENST00000536603 SYCP2LQ5T4T6 812 aa18.37■□□□□ 0.53
CCDC61-201ENST00000536603 C9orf64Q5T6V5 341 aa18.37■□□□□ 0.53
CCDC61-201ENST00000536603 LINGO4Q6UY18 593 aa18.37■□□□□ 0.53
CCDC61-201ENST00000536603 METTL3Q86U44 580 aaKnown RBP18.37■□□□□ 0.53
CCDC61-201ENST00000536603 DCAF4L2Q8NA75 395 aa18.37■□□□□ 0.53
CCDC61-201ENST00000536603 KCTD15Q96SI1 283 aaPredicted RBP18.37■□□□□ 0.53
CCDC61-201ENST00000536603 CATSPERBQ9H7T0 1116 aa18.37■□□□□ 0.53
CCDC61-201ENST00000536603 ZWILCHQ9H900 591 aa18.37■□□□□ 0.53
CCDC61-201ENST00000536603 FBRSQ9HAH7 460 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms