RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 USP25Q9UHP3 1055 aa20.02■□□□□ 0.8
LRP6-202ENST00000535731 MAPK8IP1Q9UQF2 711 aa20.02■□□□□ 0.8
LRP6-202ENST00000535731 FARP1Q9Y4F1 1045 aaPredicted RBP20.02■□□□□ 0.8
LRP6-202ENST00000535731 TDRD6O60522 2096 aaKnown RBP20.01■□□□□ 0.79
LRP6-202ENST00000535731 A6NNZ2 444 aa20.01■□□□□ 0.79
LRP6-202ENST00000535731 SFTPCP11686 197 aa20.01■□□□□ 0.79
LRP6-202ENST00000535731 STILQ15468 1287 aa20.01■□□□□ 0.79
LRP6-202ENST00000535731 Q6ZVU0 165 aa20.01■□□□□ 0.79
LRP6-202ENST00000535731 BEND5Q7L4P6 421 aa20.01■□□□□ 0.79
LRP6-202ENST00000535731 ATP6V0D2Q8N8Y2 350 aa20.01■□□□□ 0.79
LRP6-202ENST00000535731 ZNF548Q8NEK5 533 aaPredicted RBP20.01■□□□□ 0.79
LRP6-202ENST00000535731 WDR48Q8TAF3 677 aa20.01■□□□□ 0.79
LRP6-202ENST00000535731 SPATA32Q96LK8 384 aa20.01■□□□□ 0.79
LRP6-202ENST00000535731 SLC12A6Q9UHW9 1150 aa20.01■□□□□ 0.79
LRP6-202ENST00000535731 ZFR2Q9UPR6 939 aaKnown RBP20.01■□□□□ 0.79
LRP6-202ENST00000535731 PTPN13Q12923 2485 aa20■□□□□ 0.79
LRP6-202ENST00000535731 CCDC187A0A096LP49 1063 aa20■□□□□ 0.79
LRP6-202ENST00000535731 PMS2P1A4D2B8 440 aa20■□□□□ 0.79
LRP6-202ENST00000535731 TCAF2A6NFQ2 919 aa20■□□□□ 0.79
LRP6-202ENST00000535731 H3BM21 787 aa20■□□□□ 0.79
LRP6-202ENST00000535731 TPP1O14773 563 aa20■□□□□ 0.79
LRP6-202ENST00000535731 SART1O43290 800 aaKnown RBP20■□□□□ 0.79
LRP6-202ENST00000535731 BNIP3LO60238 219 aa20■□□□□ 0.79
LRP6-202ENST00000535731 PCDH8O95206 1070 aa20■□□□□ 0.79
LRP6-202ENST00000535731 ITGB2P05107 769 aa20■□□□□ 0.79
LRP6-202ENST00000535731 ITGA2BP08514 1039 aa20■□□□□ 0.79
LRP6-202ENST00000535731 ITGB6P18564 788 aa20■□□□□ 0.79
LRP6-202ENST00000535731 TBXAS1P24557 533 aaPredicted RBP20■□□□□ 0.79
LRP6-202ENST00000535731 FZD2Q14332 565 aa20■□□□□ 0.79
LRP6-202ENST00000535731 CBWD6Q4V339 395 aa20■□□□□ 0.79
LRP6-202ENST00000535731 CBWD3Q5JTY5 395 aa20■□□□□ 0.79
LRP6-202ENST00000535731 CBWD5Q5RIA9 395 aa20■□□□□ 0.79
LRP6-202ENST00000535731 TTC39BQ5VTQ0 682 aaPredicted RBP20■□□□□ 0.79
LRP6-202ENST00000535731 SYPL2Q5VXT5 272 aa20■□□□□ 0.79
LRP6-202ENST00000535731 CXorf57Q6NSI4 855 aaKnown RBP20■□□□□ 0.79
LRP6-202ENST00000535731 TAC4Q86UU9 113 aa20■□□□□ 0.79
LRP6-202ENST00000535731 SH2D3CQ8N5H7 860 aa20■□□□□ 0.79
LRP6-202ENST00000535731 TMIEQ8NEW7 156 aa20■□□□□ 0.79
LRP6-202ENST00000535731 RNF34Q969K3 372 aa20■□□□□ 0.79
LRP6-202ENST00000535731 FAM149B1Q96BN6 582 aa20■□□□□ 0.79
LRP6-202ENST00000535731 SGF29Q96ES7 293 aa20■□□□□ 0.79
LRP6-202ENST00000535731 PRMT1Q99873 361 aaKnown RBP20■□□□□ 0.79
LRP6-202ENST00000535731 SEMA3CQ99985 751 aa20■□□□□ 0.79
LRP6-202ENST00000535731 FEM1AQ9BSK4 669 aa20■□□□□ 0.79
LRP6-202ENST00000535731 SCAND2PQ9GZW5 306 aaPredicted RBP20■□□□□ 0.79
LRP6-202ENST00000535731 GPR27Q9NS67 375 aa20■□□□□ 0.79
LRP6-202ENST00000535731 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20■□□□□ 0.79
LRP6-202ENST00000535731 RCOR1Q9UKL0 485 aa20■□□□□ 0.79
LRP6-202ENST00000535731 SPTY2D1-AS1A0A0U1RR47 76 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 KCNU1A8MYU2 1149 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 M0QYV0 167 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 AQP9O43315 295 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 AFPP02771 609 aaKnown RBP19.99■□□□□ 0.79
LRP6-202ENST00000535731 CTSLP07711 333 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 EPB41P11171 864 aaKnown RBP19.99■□□□□ 0.79
LRP6-202ENST00000535731 NME1P15531 152 aaKnown RBP19.99■□□□□ 0.79
LRP6-202ENST00000535731 CHRNA3P32297 505 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 NFKB2Q00653 900 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 NR0B2Q15466 257 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 EDRF1Q3B7T1 1238 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 ZCWPW2Q504Y3 356 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 RABGAP1LQ5R372 815 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 OR6B2Q6IFH4 312 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 TMEM270Q6UE05 265 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 PTAR1Q7Z6K3 402 aaPredicted RBP19.99■□□□□ 0.79
LRP6-202ENST00000535731 CIR1Q86X95 450 aaPredicted RBP19.99■□□□□ 0.79
LRP6-202ENST00000535731 EXTL1Q92935 676 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 ZSWIM1Q9BR11 485 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 TRIM62Q9BVG3 475 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 SRRTQ9BXP5 876 aaKnown RBP19.99■□□□□ 0.79
LRP6-202ENST00000535731 DYRK4Q9NR20 520 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 WDR70Q9NW82 654 aa19.99■□□□□ 0.79
LRP6-202ENST00000535731 KPNA3O00505 521 aaPredicted RBP19.98■□□□□ 0.79
LRP6-202ENST00000535731 CETN3O15182 167 aa19.98■□□□□ 0.79
LRP6-202ENST00000535731 RPIAP49247 311 aa19.98■□□□□ 0.79
LRP6-202ENST00000535731 DEFB133Q30KQ1 61 aa19.98■□□□□ 0.79
LRP6-202ENST00000535731 TCERG1LQ5VWI1 586 aa19.98■□□□□ 0.79
LRP6-202ENST00000535731 PARGQ86W56 976 aa19.98■□□□□ 0.79
LRP6-202ENST00000535731 GLMNQ92990 594 aa19.98■□□□□ 0.79
LRP6-202ENST00000535731 CCDC114Q96M63 670 aa19.98■□□□□ 0.79
LRP6-202ENST00000535731 IL12RB2Q99665 862 aa19.98■□□□□ 0.79
LRP6-202ENST00000535731 SLC17A9Q9BYT1 436 aa19.98■□□□□ 0.79
LRP6-202ENST00000535731 IPO11Q9UI26 975 aaKnown RBP19.98■□□□□ 0.79
LRP6-202ENST00000535731 PCDHGA7Q9Y5G6 932 aa19.98■□□□□ 0.79
LRP6-202ENST00000535731 UBR5O95071 2799 aaPredicted RBP19.97■□□□□ 0.79
LRP6-202ENST00000535731 NYNRINQ9P2P1 1898 aaKnown RBP19.97■□□□□ 0.79
LRP6-202ENST00000535731 POM121BA6NF01 834 aa19.97■□□□□ 0.79
LRP6-202ENST00000535731 TRUB2O95900 331 aaKnown RBP19.97■□□□□ 0.79
LRP6-202ENST00000535731 RPL34P49207 117 aaKnown RBP19.97■□□□□ 0.79
LRP6-202ENST00000535731 LRMPQ12912 555 aa19.97■□□□□ 0.79
LRP6-202ENST00000535731 TMEM259Q4ZIN3 620 aa19.97■□□□□ 0.79
LRP6-202ENST00000535731 PERM1Q5SV97 790 aa19.97■□□□□ 0.79
LRP6-202ENST00000535731 SEL1L3Q68CR1 1132 aa19.97■□□□□ 0.79
LRP6-202ENST00000535731 CRTC1Q6UUV9 634 aa19.97■□□□□ 0.79
LRP6-202ENST00000535731 KYAT3Q6YP21 454 aaKnown RBP19.97■□□□□ 0.79
LRP6-202ENST00000535731 ERN2Q76MJ5 926 aaKnown RBP19.97■□□□□ 0.79
LRP6-202ENST00000535731 LMX1AQ8TE12 382 aa19.97■□□□□ 0.79
LRP6-202ENST00000535731 HDAC8Q9BY41 377 aa19.97■□□□□ 0.79
LRP6-202ENST00000535731 ANKMY1Q9P2S6 941 aa19.97■□□□□ 0.79
LRP6-202ENST00000535731 VPS28Q9UK41 221 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms