RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 DCDC5Q6ZRR9 648 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-202ENST00000535689 FTSJ3Q8IY81 847 aaKnown RBP3.64□□□□□ -1.83
SNHG1-202ENST00000535689 NGEFQ8N5V2 710 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 ANKRD44Q8N8A2 993 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 FAM47BQ8NA70 645 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 RAET1EQ8TD07 263 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 BCAS4Q8TDM0 211 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 STYXQ8WUJ0 223 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 ZNF764Q96H86 408 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-202ENST00000535689 CFAP53Q96M91 514 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 BBC3Q96PG8 261 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-202ENST00000535689 THAP7Q9BT49 309 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-202ENST00000535689 PRO3102Q9H379 93 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 EPS8L2Q9H6S3 715 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 RIOX1Q9H6W3 641 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 PANK3Q9H999 370 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 DBNDD1Q9H9R9 158 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 PRDM16Q9HAZ2 1276 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 KCNK9Q9NPC2 374 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 MTMR10Q9NXD2 777 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 SH3BP4Q9P0V3 963 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 IGSF9Q9P2J2 1179 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 DKK3Q9UBP4 350 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 TRMT112Q9UI30 125 aaKnown RBP3.64□□□□□ -1.83
SNHG1-202ENST00000535689 CNTN6Q9UQ52 1028 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 ABCC4O15439 1325 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 FAM205AQ6ZU69 1335 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 SH3TC1Q8TE82 1336 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 LAMB1P07942 1786 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 COL1A1P02452 1464 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-202ENST00000535689 AQP12BA6NM10 295 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 TRIM38O00635 465 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 SUV39H1O43463 412 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 SPRY2O43597 315 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 TLR2O60603 784 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 FAM155BO75949 473 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 GPTP24298 496 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 THBS4P35443 961 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 ADD2P35612 726 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 PLA2G5P39877 138 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 ARL1P40616 181 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-202ENST00000535689 DIO1P49895 249 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 RENBPP51606 427 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 RBM5P52756 815 aaKnown RBP eCLIP3.63□□□□□ -1.83
SNHG1-202ENST00000535689 SLC12A2P55011 1212 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 VAMP2P63027 116 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 TLE2Q04725 743 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 RNASELQ05823 741 aaKnown RBP3.63□□□□□ -1.83
SNHG1-202ENST00000535689 POU5F1BQ06416 359 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 TNFAIP1Q13829 316 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 MFSD13AQ14CX5 517 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 LARS2Q15031 903 aaKnown RBP3.63□□□□□ -1.83
SNHG1-202ENST00000535689 TIGD6Q17RP2 521 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 AAK1Q2M2I8 961 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 ANKRD40Q6AI12 368 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 OLFML1Q6UWY5 402 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 LDHAL6AQ6ZMR3 332 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 TDHQ8IZJ6 230 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 ENDOVQ8N8Q3 282 aaKnown RBP3.63□□□□□ -1.83
SNHG1-202ENST00000535689 SIMC1Q8NDZ2 872 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 SLC22A17Q8WUG5 538 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 AKAP1Q92667 903 aaKnown RBP eCLIP3.63□□□□□ -1.83
SNHG1-202ENST00000535689 TBC1D20Q96BZ9 403 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 SORBS1Q9BX66 1292 aaKnown RBP3.63□□□□□ -1.83
SNHG1-202ENST00000535689 NUAK2Q9H093 628 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 PCED1AQ9H1Q7 454 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 SEMA4GQ9NTN9 838 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 ST3GAL5Q9UNP4 418 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 DERAQ9Y315 318 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 AK9Q5TCS8 1911 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 UNC80Q8N2C7 3258 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 ECM29Q5VYK3 1845 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 CEMIPQ8WUJ3 1361 aa3.63□□□□□ -1.83
SNHG1-202ENST00000535689 ZNF609O15014 1411 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 COL4A5P29400 1685 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 MYO9BQ13459 2157 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 VWC2LB2RUY7 222 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 E7EVH7 732 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 CLIC1O00299 241 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 PCDH17O14917 1159 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 DSCR3O14972 297 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 ANP32CO43423 234 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 TAF5LO75529 589 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 CER1O95813 267 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 TK1P04183 234 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 CYP3A4P08684 503 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 IFIT1P09914 478 aaKnown RBP3.62□□□□□ -1.83
SNHG1-202ENST00000535689 CETPP11597 493 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 MYL6BP14649 208 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 STAT1P42224 750 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 HMGA2P52926 109 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 WDR5P61964 334 aaKnown RBP3.62□□□□□ -1.83
SNHG1-202ENST00000535689 TUBA4AP68366 448 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 SP2Q02086 613 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 GALNT1Q10472 559 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-202ENST00000535689 TBL3Q12788 808 aaKnown RBP3.62□□□□□ -1.83
SNHG1-202ENST00000535689 GRM4Q14833 912 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 POSTNQ15063 836 aa3.62□□□□□ -1.83
SNHG1-202ENST00000535689 DLGAP5Q15398 846 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms