RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 DHX58Q96C10 678 aa5.51□□□□□ -1.53
ATM-224ENST00000534625 HPDLQ96IR7 371 aa5.51□□□□□ -1.53
ATM-224ENST00000534625 ANKRD36BP1Q96IX9 119 aa5.51□□□□□ -1.53
ATM-224ENST00000534625 SLC22A12Q96S37 553 aa5.51□□□□□ -1.53
ATM-224ENST00000534625 CYP2S1Q96SQ9 504 aa5.51□□□□□ -1.53
ATM-224ENST00000534625 C7orf25Q9BPX7 421 aa5.51□□□□□ -1.53
ATM-224ENST00000534625 EBF3Q9H4W6 596 aa5.51□□□□□ -1.53
ATM-224ENST00000534625 FBRSL1Q9HCM7 1045 aaKnown RBP5.51□□□□□ -1.53
ATM-224ENST00000534625 CD248Q9HCU0 757 aa5.51□□□□□ -1.53
ATM-224ENST00000534625 TDP1Q9NUW8 608 aa5.51□□□□□ -1.53
ATM-224ENST00000534625 THG1LQ9NWX6 298 aaKnown RBP5.51□□□□□ -1.53
ATM-224ENST00000534625 GCNT4Q9P109 453 aa5.51□□□□□ -1.53
ATM-224ENST00000534625 FTSJ1Q9UET6 329 aa5.51□□□□□ -1.53
ATM-224ENST00000534625 ADAM29Q9UKF5 820 aa5.51□□□□□ -1.53
ATM-224ENST00000534625 MAGED2Q9UNF1 606 aaPredicted RBP5.51□□□□□ -1.53
ATM-224ENST00000534625 NME7Q9Y5B8 376 aa5.51□□□□□ -1.53
ATM-224ENST00000534625 PTPRDP23468 1912 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 LAMA1P25391 3075 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 KNL1Q8NG31 2342 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 FAM47E-STBD1D6RA91 191 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 EIF3DO15371 548 aaKnown RBP eCLIP5.5□□□□□ -1.53
ATM-224ENST00000534625 POLR2DO15514 142 aaKnown RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 CUTAO60888 179 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 YEATS4O95619 227 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 IL18BPO95998 194 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 KNG1P01042 644 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 EGFP01133 1207 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 RETP07949 1114 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 PDGFRBP09619 1106 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 TMEM191BP0C7N4 346 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 WARSP23381 471 aaKnown RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 CASP1P29466 404 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 MAGEA11P43364 429 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 ATXN1P54253 815 aaKnown RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 PSMC1P62191 440 aaKnown RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 ASIC1P78348 528 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 AMPD3Q01432 767 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 MYO1EQ12965 1108 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 SRSF5Q13243 272 aaKnown RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 SIM2Q14190 667 aaPredicted RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 ZNF268Q14587 947 aaPredicted RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 ZNF77Q15935 545 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 SNRNP35Q16560 246 aaKnown RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 NAIF1Q69YI7 327 aaPredicted RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 LAIR1Q6GTX8 287 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 STXBP4Q6ZWJ1 553 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 UNC13DQ70J99 1090 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 TRAPPC11Q7Z392 1133 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 LONP2Q86WA8 852 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 SPATA2LQ8IUW3 424 aaPredicted RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 WDR49Q8IV35 697 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 IQUBQ8NA54 791 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 SCFD1Q8WVM8 642 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 MRPS31Q92665 395 aaKnown RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 SECISBP2LQ93073 1101 aaKnown RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 SNX21Q969T3 373 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 FUBP3Q96I24 572 aaKnown RBP eCLIP5.5□□□□□ -1.53
ATM-224ENST00000534625 SPATA17Q96L03 361 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 ZNF396Q96N95 335 aaPredicted RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 SYT15Q9BQS2 421 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 MRPL45Q9BRJ2 306 aaKnown RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 MENTQ9BUN1 341 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 LRRC27Q9C0I9 530 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 MEGF9Q9H1U4 602 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 LINC00597Q9H2U6 94 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 CUEDC2Q9H467 287 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 KIF9Q9HAQ2 790 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 AGPAT3Q9NRZ7 376 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 KCND1Q9NSA2 647 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 POLR3BQ9NW08 1133 aaPredicted RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 UXTQ9UBK9 157 aaPredicted RBP5.5□□□□□ -1.53
ATM-224ENST00000534625 GMEB2Q9UKD1 530 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 CDH9Q9ULB4 789 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 USP18Q9UMW8 372 aa5.5□□□□□ -1.53
ATM-224ENST00000534625 CACNA1EQ15878 2313 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 CEP295Q9C0D2 2601 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 TRAV19A0A0A6YYK7 116 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 C2orf78A6NCI8 922 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 PCNX2A6NKB5 2137 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 ZNF839A8K0R7 811 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 PRR5-ARHGAP8B1AHC4 643 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 CLIC2O15247 247 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 LRP3O75074 770 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 TACC1O75410 805 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 TNNC2P02585 160 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 FAM163BP0C2L3 166 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 DLATP10515 647 aaKnown RBP5.49□□□□□ -1.53
ATM-224ENST00000534625 TNNI1P19237 187 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 BDNFP23560 247 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 GJA4P35212 333 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 GNL1P36915 607 aaPredicted RBP5.49□□□□□ -1.53
ATM-224ENST00000534625 PI4KAP42356 2102 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 GLRBP48167 497 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 CYP2J2P51589 502 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 ARHGAP8P85298 464 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 ZXDBP98169 803 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 CYP24A1Q07973 514 aa5.49□□□□□ -1.53
ATM-224ENST00000534625 GRSF1Q12849 480 aaKnown RBP eCLIP5.49□□□□□ -1.53
ATM-224ENST00000534625 CUL4BQ13620 913 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms