RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 TSGA10Q9BZW7 698 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 WDR26Q9H7D7 661 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 PNPLA8Q9NP80 782 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 TRNAU1APQ9NX07 287 aaKnown RBP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 OBP2AQ9NY56 170 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 ELOVL5Q9NYP7 299 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 KLHL13Q9P2N7 655 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 HDAC6Q9UBN7 1215 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 CIDEBQ9UHD4 219 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 DDX20Q9UHI6 824 aaKnown RBP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 G3BP2Q9UN86 482 aaKnown RBP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 DAAM1Q9Y4D1 1078 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 TTLL3Q9Y4R7 772 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 THSD7AQ9UPZ6 1657 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 PHRF1Q9P1Y6 1649 aaKnown RBP4.54□□□□□ -1.68
ITGB1-219ENST00000534049 CCDC162PA2VCL2 907 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 SOCS2O14508 198 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 FCHO1O14526 889 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 TBCAO75347 108 aaKnown RBP4.54□□□□□ -1.68
ITGB1-219ENST00000534049 PENKP01210 267 aaPredicted RBP4.54□□□□□ -1.68
ITGB1-219ENST00000534049 IGHDP01880 384 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 MT-ND5P03915 603 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 ANXA2P07355 339 aaKnown RBP4.54□□□□□ -1.68
ITGB1-219ENST00000534049 TUBBP07437 444 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 PAPOLAP51003 745 aaKnown RBP4.54□□□□□ -1.68
ITGB1-219ENST00000534049 DGKQP52824 942 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 HDAC4P56524 1084 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 ARPC4P59998 168 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 TUBA1BP68363 451 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 IFFO1Q0D2I5 559 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 CUL3Q13618 768 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 CUL4BQ13620 913 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 ARHGEF6Q15052 776 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 RCN1Q15293 331 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 INAQ16352 499 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 BOLA3Q53S33 107 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 SH2D4BQ5SQS7 431 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 RANBP10Q6VN20 620 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 TUBA1AQ71U36 451 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 RNF44Q7L0R7 432 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 NANOGP1Q8N7R0 232 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 C16orf52Q8NHV5 167 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 GOLGA1Q92805 767 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 PMM1Q92871 262 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 LRRC59Q96AG4 307 aaKnown RBP4.54□□□□□ -1.68
ITGB1-219ENST00000534049 RBM41Q96IZ5 413 aaKnown RBP4.54□□□□□ -1.68
ITGB1-219ENST00000534049 ZBTB45Q96K62 511 aaPredicted RBP4.54□□□□□ -1.68
ITGB1-219ENST00000534049 SNX22Q96L94 193 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 FAM227BQ96M60 508 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 ZNF48Q96MX3 618 aaPredicted RBP4.54□□□□□ -1.68
ITGB1-219ENST00000534049 ANKRD27Q96NW4 1050 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 JPH2Q9BR39 696 aaPredicted RBP4.54□□□□□ -1.68
ITGB1-219ENST00000534049 SLC39A3Q9BRY0 314 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 TAOK3Q9H2K8 898 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 KIF9Q9HAQ2 790 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 HEYLQ9NQ87 328 aaPredicted RBP4.54□□□□□ -1.68
ITGB1-219ENST00000534049 SEL1LQ9UBV2 794 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 VPS51Q9UID3 782 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 CORO1CQ9ULV4 474 aaPredicted RBP4.54□□□□□ -1.68
ITGB1-219ENST00000534049 ZNF148Q9UQR1 794 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 N6AMT1Q9Y5N5 214 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 NWD2Q9ULI1 1742 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 PPIP5K1Q6PFW1 1433 aa4.54□□□□□ -1.68
ITGB1-219ENST00000534049 COL15A1P39059 1388 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 SPATA31A1Q5TZJ5 1347 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 TMEM221A6NGB7 291 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 MYMKA6NI61 221 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 CYTH3O43739 400 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 ZNF189O75820 626 aaPredicted RBP4.53□□□□□ -1.68
ITGB1-219ENST00000534049 MTA2O94776 668 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 PYGLP06737 847 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 TMEM225BP0DP42 221 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 TACR3P29371 465 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 NR4A2P43354 598 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 LMAN1P49257 510 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 CLK1P49759 484 aaKnown RBP4.53□□□□□ -1.68
ITGB1-219ENST00000534049 ZNF131P52739 623 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 RPS13P62277 151 aaKnown RBP4.53□□□□□ -1.68
ITGB1-219ENST00000534049 WASHC5Q12768 1159 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 COX10Q12887 443 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 DRP2Q13474 957 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 SMC1AQ14683 1233 aaKnown RBP4.53□□□□□ -1.68
ITGB1-219ENST00000534049 C10orf25Q5T742 122 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 FBXO38Q6PIJ6 1188 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 USP17L6PQ6QN14 398 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 USP49Q70CQ1 688 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 KRT28Q7Z3Y7 464 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.53□□□□□ -1.68
ITGB1-219ENST00000534049 KRT77Q7Z794 578 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 C11orf96Q7Z7L8 435 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 TMEM110Q86TL2 294 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 TTC30AQ86WT1 665 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 NDUFAF2Q8N183 169 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.53□□□□□ -1.682e-8■■■□□ 14.6
ITGB1-219ENST00000534049 FAM71DQ8N9W8 422 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 C9orf106Q8NAJ2 232 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 TRIM58Q8NG06 486 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 GABPB2Q8TAK5 448 aaPredicted RBP4.53□□□□□ -1.68
ITGB1-219ENST00000534049 TTC8Q8TAM2 541 aa4.53□□□□□ -1.68
ITGB1-219ENST00000534049 TRPC4APQ8TEL6 797 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms