RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 TMEM145Q8NBT3 493 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 CHST14Q8NCH0 376 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 EHBP1Q8NDI1 1231 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 WBP1Q96G27 269 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 DPH1Q9BZG8 443 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 TNKS2Q9H2K2 1166 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 THAP9Q9H5L6 903 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 GDPD2Q9HCC8 539 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 METTL14Q9HCE5 456 aaKnown RBP13.37□□□□□ -0.27
COPB1-209ENST00000533096 ACP6Q9NPH0 428 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 EVA1BQ9NVM1 165 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 TMEM131Q92545 1883 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 CKAP5Q14008 2032 aa13.37□□□□□ -0.27
COPB1-209ENST00000533096 FLNBO75369 2602 aaKnown RBP13.36□□□□□ -0.27
COPB1-209ENST00000533096 FAM237AA0A1B0GTK4 181 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 TCAF2A6NFQ2 919 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 THAP12O43422 761 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 SMAD6O43541 496 aaKnown RBP13.36□□□□□ -0.27
COPB1-209ENST00000533096 SNAP91O60641 907 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 CTSLP07711 333 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 SLC2A3P11169 496 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 RRM1P23921 792 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 USP8P40818 1118 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 DEFB133Q30KQ1 61 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 ZSCAN23Q3MJ62 389 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 PIP5KL1Q5T9C9 394 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 ZNF658Q5TYW1 1059 aaPredicted RBP13.36□□□□□ -0.27
COPB1-209ENST00000533096 LINGO4Q6UY18 593 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 CCDC81Q6ZN84 652 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 EFL1Q7Z2Z2 1120 aaKnown RBP13.36□□□□□ -0.27
COPB1-209ENST00000533096 PRICKLE2Q7Z3G6 844 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 GRIN3AQ8TCU5 1115 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 LMX1AQ8TE12 382 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 FAM131CQ96AQ9 280 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 CCDC34Q96HJ3 373 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 BMFQ96LC9 184 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 TRIM62Q9BVG3 475 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 SLC4A5Q9BY07 1137 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 SYNDIG1Q9H7V2 258 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 UBE2TQ9NPD8 197 aaPredicted RBP13.36□□□□□ -0.27
COPB1-209ENST00000533096 NLGN3Q9NZ94 848 aa13.36□□□□□ -0.27
COPB1-209ENST00000533096 ZFR2Q9UPR6 939 aaKnown RBP13.36□□□□□ -0.27
COPB1-209ENST00000533096 PMS2P1A4D2B8 440 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 POM121BA6NF01 834 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 ARHGAP6O43182 974 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 MED7O43513 233 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 CNTN5O94779 1100 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 SRCP12931 536 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 HNRNPKP61978 463 aaKnown RBP eCLIP13.35□□□□□ -0.27
COPB1-209ENST00000533096 KRT83P78385 493 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 C1orf61Q13536 156 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 TTC39BQ5VTQ0 682 aaPredicted RBP13.35□□□□□ -0.27
COPB1-209ENST00000533096 NEK5Q6P3R8 708 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 GUSBP11Q6P575 273 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 ERN2Q76MJ5 926 aaKnown RBP13.35□□□□□ -0.27
COPB1-209ENST00000533096 TMEM110Q86TL2 294 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 SLC22A18ASQ8N1D0 253 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 OR2A12Q8NGT7 310 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 LMO3Q8TAP4 145 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 ZNF606Q8WXB4 792 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 TTC9Q92623 222 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 MED8Q96G25 268 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 FEM1CQ96JP0 617 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 CCDC114Q96M63 670 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 KREMEN1Q96MU8 473 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 SLC46A1Q96NT5 459 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 SPON2Q9BUD6 331 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 DUSP23Q9BVJ7 150 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 SLC17A9Q9BYT1 436 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 ASCL3Q9NQ33 180 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.35□□□□□ -0.27
COPB1-209ENST00000533096 SNX10Q9Y5X0 201 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 HS3ST4Q9Y661 456 aa13.35□□□□□ -0.27
COPB1-209ENST00000533096 SHROOM3Q8TF72 1996 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 LY6G6EA0A0G2JKS1 128 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 A0A1W2PQ27 194 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 A0A1W2PQ64 194 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 A6NNZ2 444 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 AGRPO00253 132 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 MUSKO15146 869 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 CASC3O15234 703 aaKnown RBP13.34□□□□□ -0.27
COPB1-209ENST00000533096 ALOX15BO15296 676 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 DXOO77932 396 aaKnown RBP13.34□□□□□ -0.27
COPB1-209ENST00000533096 TNFSF15O95150 251 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 SMC2O95347 1197 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 WISP1O95388 367 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 GP1BAP07359 652 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 RHOCP08134 193 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 RECQLP46063 649 aaPredicted RBP13.34□□□□□ -0.27
COPB1-209ENST00000533096 RPL34P49207 117 aaKnown RBP13.34□□□□□ -0.27
COPB1-209ENST00000533096 SGCGQ13326 291 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 FZD2Q14332 565 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 DRAP1Q14919 205 aaPredicted RBP13.34□□□□□ -0.27
COPB1-209ENST00000533096 KLHL10Q6JEL2 608 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 GCNT7Q6ZNI0 430 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 BEND5Q7L4P6 421 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 CREBRFQ8IUR6 639 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 TMIEQ8NEW7 156 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 STK32AQ8WU08 396 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 IL12RB2Q99665 862 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms