RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 B8ZZF3 427 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 RNF225M0QZC1 329 aaPredicted RBP11.85□□□□□ -0.51
CMTM1-216ENST00000533078 SCAMP1O15126 338 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 GABBR2O75899 941 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 C6P13671 934 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 PPP1R2P41236 205 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 GPD2P43304 727 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 SNX16P57768 344 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 PNOCQ13519 176 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 C3orf38Q5JPI3 329 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 CXorf57Q6NSI4 855 aaKnown RBP11.85□□□□□ -0.51
CMTM1-216ENST00000533078 ZCCHC8Q6NZY4 707 aaKnown RBP11.85□□□□□ -0.51
CMTM1-216ENST00000533078 RRAGAQ7L523 313 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 ARL14Q8N4G2 192 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 SH2D3CQ8N5H7 860 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 FAM181AQ8N9Y4 354 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 OR13H1Q8NG92 308 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 IFI44Q8TCB0 444 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 VCPIP1Q96JH7 1222 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 CEP63Q96MT8 703 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 NOX5Q96PH1 765 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 FZD3Q9NPG1 666 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 WDR70Q9NW82 654 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 UCKL1Q9NWZ5 548 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.85□□□□□ -0.51
CMTM1-216ENST00000533078 VANGL2Q9ULK5 521 aa11.85□□□□□ -0.51
CMTM1-216ENST00000533078 E5RJQ4 531 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 THAP12O43422 761 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 LETM1O95202 739 aaPredicted RBP11.84□□□□□ -0.51
CMTM1-216ENST00000533078 IGLV3-25P01717 112 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 RHOCP08134 193 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 GLI1P08151 1106 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 GNA15P30679 374 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 CHRNA3P32297 505 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 RPL34P49207 117 aaKnown RBP11.84□□□□□ -0.51
CMTM1-216ENST00000533078 RPIAP49247 311 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 CLCN6P51797 869 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 CDH4P55283 916 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 RPS21P63220 83 aaKnown RBP11.84□□□□□ -0.51
CMTM1-216ENST00000533078 ZNF284Q2VY69 593 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 EFHC1Q5JVL4 640 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 PIP5KL1Q5T9C9 394 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 KIAA1161Q6NSJ0 714 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 FBXL22Q6P050 247 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 IGF2-ASQ6U949 168 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 RBM44Q6ZP01 1051 aaKnown RBP11.84□□□□□ -0.51
CMTM1-216ENST00000533078 Q6ZSR6 202 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 ERN2Q76MJ5 926 aaKnown RBP11.84□□□□□ -0.51
CMTM1-216ENST00000533078 ZSCAN30Q86W11 494 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 PARGQ86W56 976 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 TMIEQ8NEW7 156 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 WDR48Q8TAF3 677 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 SMARCE1Q969G3 411 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 PRMT1Q99873 361 aaKnown RBP11.84□□□□□ -0.51
CMTM1-216ENST00000533078 SLC4A5Q9BY07 1137 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 SATB2Q9UPW6 733 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 HS3ST2Q9Y278 367 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 PAXBP1Q9Y5B6 917 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 HEMK1Q9Y5R4 338 aaPredicted RBP11.84□□□□□ -0.51
CMTM1-216ENST00000533078 HS3ST3A1Q9Y663 406 aa11.84□□□□□ -0.51
CMTM1-216ENST00000533078 DOCK9Q9BZ29 2069 aa11.83□□□□□ -0.51
CMTM1-216ENST00000533078 CPED1A4D0V7 1026 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 TRIM49BA6NDI0 452 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 K7ESM1 405 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 SLC28A2O43868 658 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 HSF2BPO75031 334 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 TCEA3O75764 348 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 SRCP12931 536 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 RABIFP47224 123 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 CLDN2P57739 230 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 TAS2R38P59533 333 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 CENPCQ03188 943 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 NME3Q13232 169 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 PDCLQ13371 301 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
CMTM1-216ENST00000533078 AUHQ13825 339 aaKnown RBP11.83□□□□□ -0.52
CMTM1-216ENST00000533078 LY6DQ14210 128 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 ISXQ2M1V0 245 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 DENND1BQ6P3S1 775 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 FOXR1Q6PIV2 292 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 PCSK4Q6UW60 755 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 LRRC31Q6UY01 552 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 KYAT3Q6YP21 454 aaKnown RBP11.83□□□□□ -0.52
CMTM1-216ENST00000533078 CCDC81Q6ZN84 652 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 ABI3BPQ7Z7G0 1075 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 TMEM110Q86TL2 294 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 BTN2A2Q8WVV5 523 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 KAT5Q92993 513 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 MED8Q96G25 268 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 FAM81BQ96LP2 452 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 IL12RB2Q99665 862 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 ZSWIM1Q9BR11 485 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 GOLPH3LQ9H4A5 285 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 SYNCQ9H7C4 482 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 IL36AQ9UHA7 158 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 PCDHGA8Q9Y5G5 932 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 CSNK1G3Q9Y6M4 447 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 MYO18BQ8IUG5 2567 aa11.83□□□□□ -0.52
CMTM1-216ENST00000533078 PIEZO2Q9H5I5 2752 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 FPGTO14772 594 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms