RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 UAP1L1Q3KQV9 507 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 EFHC2Q5JST6 749 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 KIAA0895LQ68EN5 471 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 PLEKHA7Q6IQ23 1121 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 Q6ZVU0 165 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 MINDY1Q8N5J2 469 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 AADATQ8N5Z0 425 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 TC2NQ8N9U0 490 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 OR2T34Q8NGX1 318 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 C1orf216Q8TAB5 229 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 CPLX3Q8WVH0 158 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 BIRC7Q96CA5 298 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 TRIM11Q96F44 468 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 NEUROG2Q9H2A3 272 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 ATP13A1Q9HD20 1204 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 FSCN3Q9NQT6 498 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 TMEM248Q9NWD8 314 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 SERGEFQ9UGK8 458 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 FARP1Q9Y4F1 1045 aaPredicted RBP17.04■□□□□ 0.32
PKP3-209ENST00000533069 NUP205Q92621 2012 aa17.04■□□□□ 0.32
PKP3-209ENST00000533069 TMCO5BA8MYB1 307 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 UPK3BL1B0FP48 263 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 UPK3BL2E5RIL1 263 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 CBX4O00257 560 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 SLC7A4O43246 635 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 OPHN1O60890 802 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 FSBPO95073 299 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 KCNK5O95279 499 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 ADRB1P08588 477 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 KCNA4P22459 653 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 FECHP22830 423 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 CD27P26842 260 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 L1CAMP32004 1257 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 GALCP54803 685 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 SLC20A2Q08357 652 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 GRIK2Q13002 908 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 IL27RAQ6UWB1 636 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 NLRP14Q86W24 1093 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 TMTC1Q8IUR5 882 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 LRRC8AQ8IWT6 810 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 OR7D4Q8NG98 312 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 FAM131CQ96AQ9 280 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 SPON2Q9BUD6 331 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 CEP44Q9C0F1 390 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 DNAAF2Q9NVR5 837 aaKnown RBP17.03■□□□□ 0.32
PKP3-209ENST00000533069 PPM1HQ9ULR3 514 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 NEU3Q9UQ49 428 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 SCINQ9Y6U3 715 aa17.03■□□□□ 0.32
PKP3-209ENST00000533069 FAM72CH0Y354 149 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 DDX3XO00571 662 aaKnown RBP eCLIP17.02■□□□□ 0.323e-24■■■■■ 37.6
PKP3-209ENST00000533069 RTN2O75298 545 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 ZMPSTE24O75844 475 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 MT-CO1P00395 513 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 FTLP02792 175 aaPredicted RBP17.02■□□□□ 0.32
PKP3-209ENST00000533069 IGHV4-34P06331 123 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 MYBL1P10243 752 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 SERPINH1P50454 418 aaKnown RBP17.02■□□□□ 0.32
PKP3-209ENST00000533069 NOVA1P51513 510 aaKnown RBP17.02■□□□□ 0.32
PKP3-209ENST00000533069 CCR5P51681 352 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 ADPRHP54922 357 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 GEMIN4P57678 1058 aaKnown RBP17.02■□□□□ 0.32
PKP3-209ENST00000533069 SLC14A1Q13336 389 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 TEAD4Q15561 434 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 FAM72AQ5TYM5 149 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 FAM72DQ6L9T8 149 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 SCYL2Q6P3W7 929 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 C22orf39Q6P5X5 142 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 NCEH1Q6PIU2 408 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 VPS36Q86VN1 386 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 FAM72BQ86X60 149 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 EPAS1Q99814 870 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 MAGEH1Q9H213 219 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 KDM4CQ9H3R0 1056 aa17.02■□□□□ 0.32
PKP3-209ENST00000533069 FAM47DPA6NHR8 397 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 EIF3CLB5ME19 914 aaKnown RBP17.01■□□□□ 0.31
PKP3-209ENST00000533069 C10orf142B7Z368 130 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 K7ERQ8 282 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 BNIP3LO60238 219 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 RAMP2O60895 175 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 CEACAM1P13688 526 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 PSMA2P25787 234 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 HTR7P34969 479 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 DRD3P35462 400 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 DEKP35659 375 aaKnown RBP17.01■□□□□ 0.31
PKP3-209ENST00000533069 RECQLP46063 649 aaPredicted RBP17.01■□□□□ 0.31
PKP3-209ENST00000533069 GRIA4P48058 902 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 ADKP55263 362 aaKnown RBP17.01■□□□□ 0.31
PKP3-209ENST00000533069 CCDC15Q0P6D6 951 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 SEMA3BQ13214 749 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 TDRD12Q587J7 1177 aaKnown RBP17.01■□□□□ 0.31
PKP3-209ENST00000533069 PSAPL1Q6NUJ1 521 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 LINGO4Q6UY18 593 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 PCDH20Q8N6Y1 951 aaKnown RBP17.01■□□□□ 0.31
PKP3-209ENST00000533069 TMIEQ8NEW7 156 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 OR2A12Q8NGT7 310 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 OR14C36Q8NHC7 312 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 PIP4K2CQ8TBX8 421 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 FNIP1Q8TF40 1166 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 ARHGEF2Q92974 986 aaKnown RBP17.01■□□□□ 0.31
PKP3-209ENST00000533069 EIF3CQ99613 913 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms