RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 FAM46CQ5VWP2 391 aa23.5■■□□□ 1.35
CAPN1-222ENST00000532285 LINGO4Q6UY18 593 aa23.5■■□□□ 1.35
CAPN1-222ENST00000532285 RNF214Q8ND24 703 aa23.5■■□□□ 1.35
CAPN1-222ENST00000532285 ACE2Q9BYF1 805 aaPredicted RBP23.5■■□□□ 1.35
CAPN1-222ENST00000532285 MIR1-1HGQ9H1L0 117 aa23.5■■□□□ 1.35
CAPN1-222ENST00000532285 MAGEH1Q9H213 219 aa23.5■■□□□ 1.35
CAPN1-222ENST00000532285 NEUROG2Q9H2A3 272 aa23.5■■□□□ 1.35
CAPN1-222ENST00000532285 NDFIP2Q9NV92 336 aa23.5■■□□□ 1.35
CAPN1-222ENST00000532285 MYO1AQ9UBC5 1043 aa23.5■■□□□ 1.35
CAPN1-222ENST00000532285 EIF2B4Q9UI10 523 aaKnown RBP23.5■■□□□ 1.35
CAPN1-222ENST00000532285 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.5■■□□□ 1.35
CAPN1-222ENST00000532285 CXorf51AA0A1B0GTR3 108 aa23.49■■□□□ 1.35
CAPN1-222ENST00000532285 A0A1B0GTW7 788 aa23.49■■□□□ 1.35
CAPN1-222ENST00000532285 K7ERQ8 282 aa23.49■■□□□ 1.35
CAPN1-222ENST00000532285 SMAD6O43541 496 aaKnown RBP23.49■■□□□ 1.35
CAPN1-222ENST00000532285 ZMPSTE24O75844 475 aa23.49■■□□□ 1.35
CAPN1-222ENST00000532285 SYPP08247 313 aa23.49■■□□□ 1.35
CAPN1-222ENST00000532285 EPHB2P29323 1055 aa23.49■■□□□ 1.35
CAPN1-222ENST00000532285 DAB2IPQ5VWQ8 1189 aa23.49■■□□□ 1.35
CAPN1-222ENST00000532285 HDDC3Q8N4P3 179 aa23.49■■□□□ 1.35
CAPN1-222ENST00000532285 AADATQ8N5Z0 425 aa23.49■■□□□ 1.35
CAPN1-222ENST00000532285 SNX19Q92543 992 aa23.49■■□□□ 1.35
CAPN1-222ENST00000532285 NCAPGQ9BPX3 1015 aa23.49■■□□□ 1.35
CAPN1-222ENST00000532285 PPM1HQ9ULR3 514 aa23.49■■□□□ 1.35
CAPN1-222ENST00000532285 HPCAL4Q9UM19 191 aa23.49■■□□□ 1.35
CAPN1-222ENST00000532285 A0A087X0T9 212 aa23.48■■□□□ 1.35
CAPN1-222ENST00000532285 LRRC72A6NJI9 287 aa23.48■■□□□ 1.35
CAPN1-222ENST00000532285 C1QTNF3-AMACRE9PGA6 284 aa23.48■■□□□ 1.35
CAPN1-222ENST00000532285 ARHGAP33O14559 1287 aa23.48■■□□□ 1.35
CAPN1-222ENST00000532285 BCAT2O15382 392 aaPredicted RBP23.48■■□□□ 1.35
CAPN1-222ENST00000532285 CREB3O43889 395 aa23.48■■□□□ 1.35
CAPN1-222ENST00000532285 BNIP3LO60238 219 aa23.48■■□□□ 1.35
CAPN1-222ENST00000532285 RAMP2O60895 175 aa23.48■■□□□ 1.35
CAPN1-222ENST00000532285 FAM228BP0C875 321 aa23.48■■□□□ 1.35
CAPN1-222ENST00000532285 HNRNPH3P31942 346 aaKnown RBP23.48■■□□□ 1.35
CAPN1-222ENST00000532285 HTR7P34969 479 aa23.48■■□□□ 1.35
CAPN1-222ENST00000532285 SERPINH1P50454 418 aaKnown RBP23.48■■□□□ 1.35
CAPN1-222ENST00000532285 ATXN3P54252 364 aaPredicted RBP23.48■■□□□ 1.35
CAPN1-222ENST00000532285 GALCP54803 685 aa23.48■■□□□ 1.35
CAPN1-222ENST00000532285 ZNF252P-AS1Q0IIN9 211 aa23.48■■□□□ 1.35
CAPN1-222ENST00000532285 SEMA3BQ13214 749 aa23.48■■□□□ 1.35
CAPN1-222ENST00000532285 ERMARDQ5T6L9 678 aa23.48■■□□□ 1.35
CAPN1-222ENST00000532285 RTL3Q8N8U3 475 aaKnown RBP23.48■■□□□ 1.35
CAPN1-222ENST00000532285 ARHGEF2Q92974 986 aaKnown RBP23.48■■□□□ 1.35
CAPN1-222ENST00000532285 TRIM7Q9C029 511 aa23.48■■□□□ 1.35
CAPN1-222ENST00000532285 CATSPERBQ9H7T0 1116 aa23.48■■□□□ 1.35
CAPN1-222ENST00000532285 ARHGAP20Q9P2F6 1191 aa23.48■■□□□ 1.35
CAPN1-222ENST00000532285 EIF3CLB5ME19 914 aaKnown RBP23.47■■□□□ 1.35
CAPN1-222ENST00000532285 FSBPO95073 299 aa23.47■■□□□ 1.35
CAPN1-222ENST00000532285 ACVRL1P37023 503 aa23.47■■□□□ 1.35
CAPN1-222ENST00000532285 MAPK8P45983 427 aa23.47■■□□□ 1.35
CAPN1-222ENST00000532285 GEMIN4P57678 1058 aaKnown RBP23.47■■□□□ 1.35
CAPN1-222ENST00000532285 ACAP1Q15027 740 aa23.47■■□□□ 1.35
CAPN1-222ENST00000532285 POLD3Q15054 466 aaPredicted RBP23.47■■□□□ 1.35
CAPN1-222ENST00000532285 C22orf39Q6P5X5 142 aa23.47■■□□□ 1.35
CAPN1-222ENST00000532285 ALKBH5Q6P6C2 394 aaKnown RBP23.47■■□□□ 1.35
CAPN1-222ENST00000532285 ZCCHC9Q8N567 271 aaKnown RBP23.47■■□□□ 1.35
CAPN1-222ENST00000532285 ARFGAP1Q8N6T3 406 aa23.47■■□□□ 1.35
CAPN1-222ENST00000532285 OR2A12Q8NGT7 310 aa23.47■■□□□ 1.35
CAPN1-222ENST00000532285 OR2T34Q8NGX1 318 aa23.47■■□□□ 1.35
CAPN1-222ENST00000532285 C1orf216Q8TAB5 229 aa23.47■■□□□ 1.35
CAPN1-222ENST00000532285 PIP4K2CQ8TBX8 421 aa23.47■■□□□ 1.35
CAPN1-222ENST00000532285 BIRC7Q96CA5 298 aa23.47■■□□□ 1.35
CAPN1-222ENST00000532285 EIF3CQ99613 913 aaKnown RBP23.47■■□□□ 1.35
CAPN1-222ENST00000532285 CEP44Q9C0F1 390 aa23.47■■□□□ 1.35
CAPN1-222ENST00000532285 SARDHQ9UL12 918 aa23.47■■□□□ 1.35
CAPN1-222ENST00000532285 AP4E1Q9UPM8 1137 aa23.47■■□□□ 1.35
CAPN1-222ENST00000532285 FAM47DPA6NHR8 397 aa23.46■■□□□ 1.35
CAPN1-222ENST00000532285 WASH4PA8MWX3 477 aa23.46■■□□□ 1.35
CAPN1-222ENST00000532285 FGF10O15520 208 aaPredicted RBP23.46■■□□□ 1.35
CAPN1-222ENST00000532285 PRPSAP2O60256 369 aa23.46■■□□□ 1.35
CAPN1-222ENST00000532285 PLXNA2O75051 1894 aa23.46■■□□□ 1.35
CAPN1-222ENST00000532285 DRD3P35462 400 aa23.46■■□□□ 1.35
CAPN1-222ENST00000532285 RECQLP46063 649 aaPredicted RBP23.46■■□□□ 1.35
CAPN1-222ENST00000532285 ARF5P84085 180 aa23.46■■□□□ 1.35
CAPN1-222ENST00000532285 KIAA0895LQ68EN5 471 aa23.46■■□□□ 1.35
CAPN1-222ENST00000532285 NCEH1Q6PIU2 408 aa23.46■■□□□ 1.35
CAPN1-222ENST00000532285 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.46■■□□□ 1.35
CAPN1-222ENST00000532285 VSTM4Q8IW00 320 aa23.46■■□□□ 1.35
CAPN1-222ENST00000532285 ASCC3Q8N3C0 2202 aaKnown RBP23.46■■□□□ 1.35
CAPN1-222ENST00000532285 TMIEQ8NEW7 156 aa23.46■■□□□ 1.35
CAPN1-222ENST00000532285 OR8K1Q8NGG5 319 aa23.46■■□□□ 1.35
CAPN1-222ENST00000532285 OR14C36Q8NHC7 312 aa23.46■■□□□ 1.35
CAPN1-222ENST00000532285 GTPBP2Q9BX10 602 aaKnown RBP23.46■■□□□ 1.35
CAPN1-222ENST00000532285 ZDHHC5Q9C0B5 715 aa23.46■■□□□ 1.35
CAPN1-222ENST00000532285 FSCN3Q9NQT6 498 aa23.46■■□□□ 1.35
CAPN1-222ENST00000532285 DONSONQ9NYP3 566 aa23.46■■□□□ 1.35
CAPN1-222ENST00000532285 PCSK1NQ9UHG2 260 aa23.46■■□□□ 1.35
CAPN1-222ENST00000532285 SLC7A4O43246 635 aa23.45■■□□□ 1.34
CAPN1-222ENST00000532285 TPM1P09493 284 aa23.45■■□□□ 1.34
CAPN1-222ENST00000532285 CD27P26842 260 aa23.45■■□□□ 1.34
CAPN1-222ENST00000532285 MIPP30301 263 aa23.45■■□□□ 1.34
CAPN1-222ENST00000532285 CHRNA3P32297 505 aa23.45■■□□□ 1.34
CAPN1-222ENST00000532285 YBEYP58557 167 aaPredicted RBP23.45■■□□□ 1.34
CAPN1-222ENST00000532285 TPI1P60174 286 aa23.45■■□□□ 1.34
CAPN1-222ENST00000532285 CCDC122Q5T0U0 273 aa23.45■■□□□ 1.34
CAPN1-222ENST00000532285 PSTKQ8IV42 348 aaKnown RBP23.45■■□□□ 1.34
CAPN1-222ENST00000532285 PCDH20Q8N6Y1 951 aaKnown RBP23.45■■□□□ 1.34
CAPN1-222ENST00000532285 FAM131CQ96AQ9 280 aa23.45■■□□□ 1.34
CAPN1-222ENST00000532285 DNAJC7Q99615 494 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms