RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 ISM2Q6H9L7 571 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 FBXL22Q6P050 247 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 DENND1BQ6P3S1 775 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 KRBA2Q6ZNG9 492 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 HORMAD1Q86X24 394 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 JAMLQ86YT9 394 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 CCDC97Q96F63 343 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-206ENST00000531430 CCDC114Q96M63 670 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 SLC46A1Q96NT5 459 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 MED15Q96RN5 788 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 IL12RB2Q99665 862 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 FEM1AQ9BSK4 669 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 DUSP23Q9BVJ7 150 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 GTPBP4Q9BZE4 634 aaKnown RBP9.48□□□□□ -0.89
NEDD8-206ENST00000531430 DDIT4Q9NX09 232 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 NLGN3Q9NZ94 848 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 HPSEQ9Y251 543 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 COQ4Q9Y3A0 265 aa9.48□□□□□ -0.89
NEDD8-206ENST00000531430 TCAF2A6NFQ2 919 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 K7ERQ8 282 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 ATP9BO43861 1147 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 GRAP2O75791 330 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 ZNF202O95125 648 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 LETM1O95202 739 aaPredicted RBP9.47□□□□□ -0.89
NEDD8-206ENST00000531430 MT-CO1P00395 513 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 GIMD1P0DJR0 217 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 USP8P40818 1118 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 GPD2P43304 727 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 FMO5P49326 533 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 PLK1P53350 603 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 HNRNPKP61978 463 aaKnown RBP eCLIP9.47□□□□□ -0.895e-7■□□□□ 9.7
NEDD8-206ENST00000531430 KRT83P78385 493 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 SGCGQ13326 291 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 PNOCQ13519 176 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 C1orf61Q13536 156 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 AUHQ13825 339 aaKnown RBP9.47□□□□□ -0.89
NEDD8-206ENST00000531430 DRAP1Q14919 205 aaPredicted RBP9.47□□□□□ -0.89
NEDD8-206ENST00000531430 TAF5Q15542 800 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 PIP5KL1Q5T9C9 394 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 SEL1L3Q68CR1 1132 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 CXorf57Q6NSI4 855 aaKnown RBP9.47□□□□□ -0.89
NEDD8-206ENST00000531430 NEK5Q6P3R8 708 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 GUSBP11Q6P575 273 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 RBM44Q6ZP01 1051 aaKnown RBP9.47□□□□□ -0.89
NEDD8-206ENST00000531430 USP53Q70EK8 1073 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 HSCBQ8IWL3 235 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 DEFB106AQ8N104 65 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 RYBPQ8N488 228 aaPredicted RBP9.47□□□□□ -0.89
NEDD8-206ENST00000531430 ARL14Q8N4G2 192 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 SH2D3CQ8N5H7 860 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 UBR7Q8N806 425 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 CHST14Q8NCH0 376 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 OR52K2Q8NGK3 314 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 GRIN3AQ8TCU5 1115 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 TTC9Q92623 222 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 PRR11Q96HE9 360 aaPredicted RBP9.47□□□□□ -0.89
NEDD8-206ENST00000531430 CCDC34Q96HJ3 373 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 FEM1CQ96JP0 617 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 SPON2Q9BUD6 331 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 TRIM62Q9BVG3 475 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 SLC17A9Q9BYT1 436 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 TNKS2Q9H2K2 1166 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 POPDC2Q9HBU9 364 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 ASCL3Q9NQ33 180 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 GULP1Q9UBP9 304 aa9.47□□□□□ -0.89
NEDD8-206ENST00000531430 PMS2P1A4D2B8 440 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 TRIM49BA6NDI0 452 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 POM121BA6NF01 834 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 A6NNZ2 444 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 C10orf142B7Z368 130 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 E5RJQ4 531 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 H3BM21 787 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 K7ENP7 123 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 NEMP1O14524 444 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 ALOX15BO15296 676 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 SLC16A3O15427 465 aaKnown RBP9.46□□□□□ -0.9
NEDD8-206ENST00000531430 THAP12O43422 761 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 SNAP91O60641 907 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 DXOO77932 396 aaKnown RBP9.46□□□□□ -0.9
NEDD8-206ENST00000531430 GJB6O95452 261 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 ADCY5O95622 1261 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 PRNPP04156 253 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 GP1BAP07359 652 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 CTSLP07711 333 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 RHOCP08134 193 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 SLC2A3P11169 496 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 SRCP12931 536 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 JUNDP17535 347 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 RRM1P23921 792 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 CCR1P32246 355 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 IRAK1P51617 712 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 PMS1P54277 932 aaKnown RBP9.46□□□□□ -0.9
NEDD8-206ENST00000531430 ADKP55263 362 aaKnown RBP9.46□□□□□ -0.9
NEDD8-206ENST00000531430 KRT85P78386 507 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 NFKB2Q00653 900 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 NNTQ13423 1086 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 PDE1CQ14123 709 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-206ENST00000531430 NR0B2Q15466 257 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 TTC39BQ5VTQ0 682 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-206ENST00000531430 INO80CQ6PI98 192 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms