RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 ABHD17AQ96GS6 310 aa13.89□□□□□ -0.19
SSRP1-203ENST00000526696 GFM1Q96RP9 751 aaKnown RBP13.89□□□□□ -0.19
SSRP1-203ENST00000526696 UBXN6Q9BZV1 441 aa13.89□□□□□ -0.19
SSRP1-203ENST00000526696 NUCKS1Q9H1E3 243 aaKnown RBP13.89□□□□□ -0.19
SSRP1-203ENST00000526696 DAAM1Q9Y4D1 1078 aa13.89□□□□□ -0.19
SSRP1-203ENST00000526696 PCDHB11Q9Y5F2 797 aa13.89□□□□□ -0.19
SSRP1-203ENST00000526696 HS3ST3A1Q9Y663 406 aa13.89□□□□□ -0.19
SSRP1-203ENST00000526696 TMX2-CTNND1H3BSU7 103 aa13.88□□□□□ -0.19
SSRP1-203ENST00000526696 EIF3DO15371 548 aaKnown RBP eCLIP13.88□□□□□ -0.19
SSRP1-203ENST00000526696 LIFP15018 202 aa13.88□□□□□ -0.19
SSRP1-203ENST00000526696 CD58P19256 250 aa13.88□□□□□ -0.19
SSRP1-203ENST00000526696 GRNP28799 593 aaKnown RBP13.88□□□□□ -0.19
SSRP1-203ENST00000526696 RPIAP49247 311 aa13.88□□□□□ -0.19
SSRP1-203ENST00000526696 SLC11A2P49281 568 aa13.88□□□□□ -0.19
SSRP1-203ENST00000526696 MAPK10P53779 464 aa13.88□□□□□ -0.19
SSRP1-203ENST00000526696 ADKP55263 362 aaKnown RBP13.88□□□□□ -0.19
SSRP1-203ENST00000526696 TMEM259Q4ZIN3 620 aa13.88□□□□□ -0.19
SSRP1-203ENST00000526696 DCAF6Q58WW2 860 aa13.88□□□□□ -0.19
SSRP1-203ENST00000526696 MS4A13Q5J8X5 152 aa13.88□□□□□ -0.19
SSRP1-203ENST00000526696 KYAT3Q6YP21 454 aaKnown RBP13.88□□□□□ -0.19
SSRP1-203ENST00000526696 NKD1Q969G9 470 aa13.88□□□□□ -0.19
SSRP1-203ENST00000526696 CCDC74AQ96AQ1 378 aa13.88□□□□□ -0.19
SSRP1-203ENST00000526696 CLPBQ9H078 707 aa13.88□□□□□ -0.19
SSRP1-203ENST00000526696 CCDC39Q9UFE4 941 aa13.88□□□□□ -0.19
SSRP1-203ENST00000526696 CCDC168Q8NDH2 2452 aa13.88□□□□□ -0.19
SSRP1-203ENST00000526696 DNHD1Q96M86 4753 aa13.88□□□□□ -0.19
SSRP1-203ENST00000526696 CSMD2Q7Z408 3487 aa13.88□□□□□ -0.19
SSRP1-203ENST00000526696 PRR19A6NJB7 356 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 LMO7DNF2Z398 122 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 K7EM74 188 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 MCF2LO15068 1137 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 MOCS3O95396 460 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 RPLP0P05388 317 aaKnown RBP13.87□□□□□ -0.19
SSRP1-203ENST00000526696 CELA2BP08218 269 aaPredicted RBP13.87□□□□□ -0.19
SSRP1-203ENST00000526696 NR1D1P20393 614 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 AP3M2P53677 418 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 ZFP36L1Q07352 338 aaKnown RBP13.87□□□□□ -0.19
SSRP1-203ENST00000526696 KLRB1Q12918 225 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 PDE1CQ14123 709 aaPredicted RBP13.87□□□□□ -0.19
SSRP1-203ENST00000526696 ZNF394Q53GI3 561 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 C1QL3Q5VWW1 255 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 MSANTD2Q6P1R3 559 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 Q6ZVU0 165 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 STXBP4Q6ZWJ1 553 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 TMPRSS9Q7Z410 1059 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 CCDC65Q8IXS2 484 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 KYQ8NBH2 561 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 PMEPA1Q969W9 287 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 AZIN2Q96A70 460 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 CLIC6Q96NY7 704 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 LRRC61Q9BV99 259 aa13.87□□□□□ -0.19
SSRP1-203ENST00000526696 CPEB1Q9BZB8 566 aaKnown RBP13.87□□□□□ -0.19
SSRP1-203ENST00000526696 WIPF3A6NGB9 483 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 C1QTNF3-AMACRE9PGA6 284 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 YY2O15391 372 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 HLA-DRAP01903 254 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 RPN1P04843 607 aaKnown RBP13.86□□□□□ -0.19
SSRP1-203ENST00000526696 CD82P27701 267 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 PRRT3Q5FWE3 981 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 C1orf220Q5T0J3 134 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 NUGGCQ68CJ6 796 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 SV2AQ7L0J3 742 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 MAMDC2Q7Z304 686 aaPredicted RBP13.86□□□□□ -0.19
SSRP1-203ENST00000526696 C12orf56Q8IXR9 622 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 FAM174AQ8TBP5 190 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 TAF4BQ92750 862 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 GLMNQ92990 594 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 TATDN2Q93075 761 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 FCRL2Q96LA5 508 aaPredicted RBP13.86□□□□□ -0.19
SSRP1-203ENST00000526696 HEXIM2Q96MH2 286 aaKnown RBP13.86□□□□□ -0.19
SSRP1-203ENST00000526696 TMEM74Q96NL1 305 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 PANK2Q9BZ23 570 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 LRRN3Q9H3W5 708 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 SPASTQ9UBP0 616 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 XPO7Q9UIA9 1087 aaKnown RBP13.86□□□□□ -0.19
SSRP1-203ENST00000526696 SPG11Q96JI7 2443 aa13.86□□□□□ -0.19
SSRP1-203ENST00000526696 ALOX15BO15296 676 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 NKX2-8O15522 239 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 DUX1O43812 170 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 ATP9BO43861 1147 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 EXOC3O60645 756 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 GABBR2O75899 941 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 PCDH8O95206 1070 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 PAK4O96013 591 aaPredicted RBP13.85□□□□□ -0.19
SSRP1-203ENST00000526696 PDGFRAP16234 1089 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 ITGB7P26010 798 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 RABIFP47224 123 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 ADIGQ0VDE8 80 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 KRTAP21-3Q3LHN1 58 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 LACTB2Q53H82 288 aaPredicted RBP13.85□□□□□ -0.19
SSRP1-203ENST00000526696 UNC45BQ8IWX7 931 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 SLC4A11Q8NBS3 891 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 ZSCAN31Q96LW9 406 aaPredicted RBP13.85□□□□□ -0.19
SSRP1-203ENST00000526696 KLF6Q99612 283 aaPredicted RBP13.85□□□□□ -0.19
SSRP1-203ENST00000526696 CYP3A43Q9HB55 503 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 ABCC13Q9NSE7 274 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 SIRPGQ9P1W8 387 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 GULP1Q9UBP9 304 aa13.85□□□□□ -0.19
SSRP1-203ENST00000526696 APOBEC3BQ9UH17 382 aaKnown RBP13.85□□□□□ -0.19
SSRP1-203ENST00000526696 FBXO2Q9UK22 296 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms