RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 MSL3P1P0C860 447 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 NELFEP18615 380 aaKnown RBP13.86□□□□□ -0.19
LRRK1-202ENST00000525284 NR1H2P55055 460 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 PDIA5Q14554 519 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 ATCAYQ86WG3 371 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 EXD2Q9NVH0 621 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 DPP3Q9NY33 737 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 PSMD13Q9UNM6 376 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 OR10H3O60404 316 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 CKMP06732 381 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 GALK1P51570 392 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 SPIBQ01892 262 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 PHF10Q8WUB8 498 aaKnown RBP13.85□□□□□ -0.19
LRRK1-202ENST00000525284 DHRS1Q96LJ7 313 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 NAT9Q9BTE0 207 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 WDR12Q9GZL7 423 aaKnown RBP13.85□□□□□ -0.19
LRRK1-202ENST00000525284 TPK1Q9H3S4 243 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 SEMA4BQ9NPR2 832 aaPredicted RBP13.85□□□□□ -0.19
LRRK1-202ENST00000525284 AKAP7Q9P0M2 348 aaPredicted RBP13.85□□□□□ -0.19
LRRK1-202ENST00000525284 APOL3O95236 402 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 TNK2Q07912 1038 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 ZNHIT3Q15649 155 aaPredicted RBP13.85□□□□□ -0.19
LRRK1-202ENST00000525284 EGFLAMQ63HQ2 1017 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 KCNMB4Q86W47 210 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 RAB43Q86YS6 212 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 DEPDC4Q8N2C3 294 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 NMRAL1Q9HBL8 299 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 RAPGEFL1Q9UHV5 662 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 TRPM1Q7Z4N2 1603 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 TSPAN1O60635 241 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 IFI30P13284 250 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 FOSL1P15407 271 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 MAN2A2P49641 1150 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 UGT2B15P54855 530 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 CES3Q6UWW8 571 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 ACOT1Q86TX2 421 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 ZNF433Q8N7K0 673 aaPredicted RBP13.85□□□□□ -0.19
LRRK1-202ENST00000525284 MCOLN3Q8TDD5 553 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 BSDC1Q9NW68 430 aaPredicted RBP13.85□□□□□ -0.19
LRRK1-202ENST00000525284 COMMD3-BMI1R4GMX3 469 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 ARHGAP31Q2M1Z3 1444 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 ABHD14A-ACY1A0A1B0GW23 586 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 ANKDD1BA6NHY2 528 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 TTC34A8MYJ7 566 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 ARPC4P59998 168 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 PSME3P61289 254 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 CDK16Q00536 496 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 CUL2Q13617 745 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 GCNT7Q6ZNI0 430 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 CDADC1Q9BWV3 514 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 MROH7-TTC4A0A0A0MT08 1334 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 TRIM64A6NGJ6 449 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 ACSM2AQ08AH3 577 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 ACAP2Q15057 778 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 ACSM2BQ68CK6 577 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 DEF8Q6ZN54 512 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 C12orf56Q8IXR9 622 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 DSELQ8IZU8 1212 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 SFRP1Q8N474 314 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 OR2L3Q8NG85 312 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 MCFD2Q8NI22 146 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 TEX47Q8TBZ9 253 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 FBXO25Q8TCJ0 367 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 ITCHQ96J02 903 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 TBC1D13Q9NVG8 400 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 UCKL1Q9NWZ5 548 aa13.85□□□□□ -0.19
LRRK1-202ENST00000525284 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.85□□□□□ -0.19
LRRK1-202ENST00000525284 H3BM21 787 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 SCN2BO60939 215 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 USP12O75317 370 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 ITIH1P19827 911 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 TCF7P36402 384 aaPredicted RBP13.84□□□□□ -0.19
LRRK1-202ENST00000525284 ALDH7A1P49419 539 aaKnown RBP13.84□□□□□ -0.19
LRRK1-202ENST00000525284 PRKCEQ02156 737 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 SGCGQ13326 291 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 FOXR1Q6PIV2 292 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 SETD6Q8TBK2 473 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 PIH1D2Q8WWB5 315 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 ELMO1Q92556 727 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 DLG3Q92796 817 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 C15orf38-AP3S2A0A0A6YYH1 394 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 SLC12A8A0AV02 714 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 A8MX80 341 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 RSL1D1O76021 490 aaKnown RBP13.84□□□□□ -0.19
LRRK1-202ENST00000525284 RHOBTB3O94955 611 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 FSBPO95073 299 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 TKTP29401 623 aaKnown RBP13.84□□□□□ -0.19
LRRK1-202ENST00000525284 ELF3P78545 371 aaPredicted RBP13.84□□□□□ -0.19
LRRK1-202ENST00000525284 INTS11Q5TA45 600 aaKnown RBP13.84□□□□□ -0.19
LRRK1-202ENST00000525284 ARPINQ7Z6K5 226 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 FAM131BQ86XD5 332 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 ZZZ3Q8IYH5 903 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 ADGRG2Q8IZP9 1017 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 CHST4Q8NCG5 386 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 ZKSCAN4Q969J2 545 aaPredicted RBP13.84□□□□□ -0.19
LRRK1-202ENST00000525284 TP53INP1Q96A56 240 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 CELF6Q96J87 481 aaKnown RBP13.84□□□□□ -0.19
LRRK1-202ENST00000525284 KIAA1257Q9ULG3 409 aa13.84□□□□□ -0.19
LRRK1-202ENST00000525284 CSDE1O75534 798 aaKnown RBP13.84□□□□□ -0.19
LRRK1-202ENST00000525284 ZMPSTE24O75844 475 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms