RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 MT-CO1P00395 513 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 GP1BAP07359 652 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 MYF5P13349 255 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 HNRNPA2B1P22626 353 aaKnown RBP23.31■■□□□ 1.32
PVT1-218ENST00000523328 GGCXP38435 758 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 LSSP48449 732 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 TMPRSS3P57727 454 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 RHDQ02161 417 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 ZNF177Q13360 481 aaPredicted RBP23.31■■□□□ 1.32
PVT1-218ENST00000523328 C5orf22Q49AR2 442 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 TTI2Q6NXR4 508 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 GCNT7Q6ZNI0 430 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 LSMEM2Q8N112 164 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 OR2A12Q8NGT7 310 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 RNF34Q969K3 372 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 WBP1Q96G27 269 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 CALN1Q9BXU9 219 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 NLGN3Q9NZ94 848 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 ZFR2Q9UPR6 939 aaKnown RBP23.31■■□□□ 1.32
PVT1-218ENST00000523328 HS3ST4Q9Y661 456 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 GLI1P08151 1106 aa23.3■■□□□ 1.32
PVT1-218ENST00000523328 AKT2P31751 481 aa23.3■■□□□ 1.32
PVT1-218ENST00000523328 CHRNA3P32297 505 aa23.3■■□□□ 1.32
PVT1-218ENST00000523328 UCNP55089 124 aa23.3■■□□□ 1.32
PVT1-218ENST00000523328 CLDN2P57739 230 aa23.3■■□□□ 1.32
PVT1-218ENST00000523328 ERVPABLB-1P60509 514 aa23.3■■□□□ 1.32
PVT1-218ENST00000523328 TAF1BQ53T94 588 aaPredicted RBP23.3■■□□□ 1.32
PVT1-218ENST00000523328 ABI3BPQ7Z7G0 1075 aa23.3■■□□□ 1.32
PVT1-218ENST00000523328 C14orf80Q86SX3 495 aa23.3■■□□□ 1.32
PVT1-218ENST00000523328 TRIM59Q8IWR1 403 aa23.3■■□□□ 1.32
PVT1-218ENST00000523328 FAM181AQ8N9Y4 354 aa23.3■■□□□ 1.32
PVT1-218ENST00000523328 TMIEQ8NEW7 156 aa23.3■■□□□ 1.32
PVT1-218ENST00000523328 IFT43Q96FT9 208 aa23.3■■□□□ 1.32
PVT1-218ENST00000523328 PSMB7Q99436 277 aa23.3■■□□□ 1.32
PVT1-218ENST00000523328 INTS2Q9H0H0 1204 aaKnown RBP23.3■■□□□ 1.32
PVT1-218ENST00000523328 POLR1BQ9H9Y6 1135 aa23.3■■□□□ 1.32
PVT1-218ENST00000523328 ASCL3Q9NQ33 180 aa23.3■■□□□ 1.32
PVT1-218ENST00000523328 J3QKU1 62 aa23.29■■□□□ 1.32
PVT1-218ENST00000523328 KPNA3O00505 521 aaPredicted RBP23.29■■□□□ 1.32
PVT1-218ENST00000523328 THAP12O43422 761 aa23.29■■□□□ 1.32
PVT1-218ENST00000523328 LZTS3O60299 673 aaPredicted RBP23.29■■□□□ 1.32
PVT1-218ENST00000523328 CSO75390 466 aaKnown RBP23.29■■□□□ 1.32
PVT1-218ENST00000523328 CLDN11O75508 207 aa23.29■■□□□ 1.32
PVT1-218ENST00000523328 ALPPL2P10696 532 aa23.29■■□□□ 1.32
PVT1-218ENST00000523328 GNA15P30679 374 aa23.29■■□□□ 1.32
PVT1-218ENST00000523328 STIM1Q13586 685 aa23.29■■□□□ 1.32
PVT1-218ENST00000523328 ARHGAP40Q5TG30 622 aa23.29■■□□□ 1.32
PVT1-218ENST00000523328 BROXQ5VW32 411 aa23.29■■□□□ 1.32
PVT1-218ENST00000523328 CPXM1Q96SM3 734 aa23.29■■□□□ 1.32
PVT1-218ENST00000523328 GPR27Q9NS67 375 aa23.29■■□□□ 1.32
PVT1-218ENST00000523328 ASNSD1Q9NWL6 643 aa23.29■■□□□ 1.32
PVT1-218ENST00000523328 K7ERQ8 282 aa23.28■■□□□ 1.32
PVT1-218ENST00000523328 SCAMP1O15126 338 aa23.28■■□□□ 1.32
PVT1-218ENST00000523328 SNAP91O60641 907 aa23.28■■□□□ 1.32
PVT1-218ENST00000523328 GRAP2O75791 330 aa23.28■■□□□ 1.32
PVT1-218ENST00000523328 CDH4P55283 916 aa23.28■■□□□ 1.32
PVT1-218ENST00000523328 TMEM259Q4ZIN3 620 aa23.28■■□□□ 1.32
PVT1-218ENST00000523328 SEL1L3Q68CR1 1132 aa23.28■■□□□ 1.32
PVT1-218ENST00000523328 ISM2Q6H9L7 571 aa23.28■■□□□ 1.32
PVT1-218ENST00000523328 WDTC1Q8N5D0 677 aa23.28■■□□□ 1.32
PVT1-218ENST00000523328 ATP11CQ8NB49 1132 aa23.28■■□□□ 1.32
PVT1-218ENST00000523328 KCNE4Q8WWG9 221 aa23.28■■□□□ 1.32
PVT1-218ENST00000523328 SEMA4CQ9C0C4 833 aa23.28■■□□□ 1.32
PVT1-218ENST00000523328 MUC3BQ9H195 1237 aa23.28■■□□□ 1.32
PVT1-218ENST00000523328 USP29Q9HBJ7 922 aa23.28■■□□□ 1.32
PVT1-218ENST00000523328 UBE2TQ9NPD8 197 aaPredicted RBP23.28■■□□□ 1.32
PVT1-218ENST00000523328 FARP1Q9Y4F1 1045 aaPredicted RBP23.28■■□□□ 1.32
PVT1-218ENST00000523328 KIF26BQ2KJY2 2108 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 RP1P56715 2156 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 MYO18BQ8IUG5 2567 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 NEMP2A6NFY4 417 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 K7ESM1 405 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 SMAD6O43541 496 aaKnown RBP23.27■■□□□ 1.32
PVT1-218ENST00000523328 HSF2BPO75031 334 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 PAGE1O75459 146 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 CNTN5O94779 1100 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 RRM1P23921 792 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 KRT83P78385 493 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 CCDC15Q0P6D6 951 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 MTA1Q13330 715 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 ZNF542PQ5EBM4 170 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 EFHC1Q5JVL4 640 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 ERN2Q76MJ5 926 aaKnown RBP23.27■■□□□ 1.32
PVT1-218ENST00000523328 CHST14Q8NCH0 376 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 SNRNP27Q8WVK2 155 aaKnown RBP23.27■■□□□ 1.32
PVT1-218ENST00000523328 BMFQ96LC9 184 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 CCDC114Q96M63 670 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 DUSP23Q9BVJ7 150 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 OSBPL2Q9H1P3 480 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 VPS51Q9UID3 782 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 SSUH2Q9Y2M2 353 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 DOCK4Q8N1I0 1966 aa23.27■■□□□ 1.32
PVT1-218ENST00000523328 NEBLO76041 1014 aa23.26■■□□□ 1.31
PVT1-218ENST00000523328 PCDH8O95206 1070 aa23.26■■□□□ 1.31
PVT1-218ENST00000523328 PRNPP04156 253 aa23.26■■□□□ 1.31
PVT1-218ENST00000523328 DUSP3P51452 185 aaPredicted RBP23.26■■□□□ 1.31
PVT1-218ENST00000523328 MARSP56192 900 aaKnown RBP23.26■■□□□ 1.31
PVT1-218ENST00000523328 NME3Q13232 169 aa23.26■■□□□ 1.31
PVT1-218ENST00000523328 ALFQ53S48 1182 aa23.26■■□□□ 1.31
PVT1-218ENST00000523328 OR6B2Q6IFH4 312 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms