RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 PCSK1NQ9UHG2 260 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 ATXN2Q99700 1313 aaKnown RBP16.75■□□□□ 0.27
PABPC1-221ENST00000522720 LNP1A1A4G5 178 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 WASH4PA8MWX3 477 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 SLC30A4O14863 429 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 ALOX15BO15296 676 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 SMAD6O43541 496 aaKnown RBP16.75■□□□□ 0.27
PABPC1-221ENST00000522720 CREB3O43889 395 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 PRPSAP2O60256 369 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 RAMP2O60895 175 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 LRCH4O75427 683 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 SEMA4FO95754 770 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 IL1BP01584 269 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 PSMD8P48556 350 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 ARF5P84085 180 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
PABPC1-221ENST00000522720 SLC18A3Q16572 532 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 ASTE1Q2TB18 679 aaPredicted RBP16.75■□□□□ 0.27
PABPC1-221ENST00000522720 DCAF12L1Q5VU92 463 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 PSTKQ8IV42 348 aaKnown RBP16.75■□□□□ 0.27
PABPC1-221ENST00000522720 AADATQ8N5Z0 425 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 ARHGEF2Q92974 986 aaKnown RBP16.75■□□□□ 0.27
PABPC1-221ENST00000522720 PEBP4Q96S96 227 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 OMDQ99983 421 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 RTKNQ9BST9 563 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 NUSAP1Q9BXS6 441 aaKnown RBP16.75■□□□□ 0.27
PABPC1-221ENST00000522720 NEUROG2Q9H2A3 272 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 C6orf106Q9H6K1 298 aaPredicted RBP16.75■□□□□ 0.27
PABPC1-221ENST00000522720 NOL6Q9H6R4 1146 aaKnown RBP16.75■□□□□ 0.27
PABPC1-221ENST00000522720 CATSPERBQ9H7T0 1116 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 ABHD10Q9NUJ1 306 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 GPATCH2LQ9NWQ4 482 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 SERGEFQ9UGK8 458 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 PPM1HQ9ULR3 514 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 FZD4Q9ULV1 537 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 SLC6A14Q9UN76 642 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 AP4E1Q9UPM8 1137 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 FARP1Q9Y4F1 1045 aaPredicted RBP16.75■□□□□ 0.27
PABPC1-221ENST00000522720 CACNA1AO00555 2505 aa16.75■□□□□ 0.27
PABPC1-221ENST00000522720 A0A1W2PP55 124 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 SSU72P8A0A1W2PR75 194 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 MEI4A8MW99 385 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 FGF10O15520 208 aaPredicted RBP16.74■□□□□ 0.27
PABPC1-221ENST00000522720 MFAP3LO75121 409 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 SERPINF2P08697 491 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 GOT1P17174 413 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 MAOBP27338 520 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 PCK1P35558 622 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 SERPINH1P50454 418 aaKnown RBP16.74■□□□□ 0.27
PABPC1-221ENST00000522720 GALCP54803 685 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 GFPT1Q06210 699 aaPredicted RBP16.74■□□□□ 0.27
PABPC1-221ENST00000522720 TBX2Q13207 712 aaPredicted RBP16.74■□□□□ 0.27
PABPC1-221ENST00000522720 POLD3Q15054 466 aaPredicted RBP16.74■□□□□ 0.27
PABPC1-221ENST00000522720 CA9Q16790 459 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 STPG1Q5TH74 334 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 FAM46CQ5VWP2 391 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 CYP4V2Q6ZWL3 525 aaPredicted RBP16.74■□□□□ 0.27
PABPC1-221ENST00000522720 HDDC3Q8N4P3 179 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 OR2A12Q8NGT7 310 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 CCDC114Q96M63 670 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 SNRNP25Q9BV90 132 aaKnown RBP16.74■□□□□ 0.27
PABPC1-221ENST00000522720 EDEM2Q9BV94 578 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 NUP85Q9BW27 656 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 TRIM5Q9C035 493 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 CEP44Q9C0F1 390 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 DHX35Q9H5Z1 703 aaKnown RBP16.74■□□□□ 0.27
PABPC1-221ENST00000522720 DONSONQ9NYP3 566 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 SUSD2Q9UGT4 822 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 SARDHQ9UL12 918 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 HPCAL4Q9UM19 191 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.74■□□□□ 0.27
PABPC1-221ENST00000522720 DNAH14Q0VDD8 3507 aa16.74■□□□□ 0.27
PABPC1-221ENST00000522720 SPTBN2O15020 2390 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 KDELR3O43731 214 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 BNIP3LO60238 219 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 ZNF821O75541 412 aaPredicted RBP16.73■□□□□ 0.27
PABPC1-221ENST00000522720 RNASEH2AO75792 299 aaKnown RBP16.73■□□□□ 0.27
PABPC1-221ENST00000522720 CD160O95971 181 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 CFIP05156 583 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 GNSP15586 552 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 ADKP55263 362 aaKnown RBP16.73■□□□□ 0.27
PABPC1-221ENST00000522720 YBEYP58557 167 aaPredicted RBP16.73■□□□□ 0.27
PABPC1-221ENST00000522720 TPI1P60174 286 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 PIGHQ14442 188 aaPredicted RBP16.73■□□□□ 0.27
PABPC1-221ENST00000522720 C22orf39Q6P5X5 142 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 UMODL1-AS1Q8N2C9 162 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 NIPA2Q8N8Q9 360 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 PIP4K2CQ8TBX8 421 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 ARHGEF26Q96DR7 871 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 CHP1Q99653 195 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 RBSNQ9H1K0 784 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 DEF6Q9H4E7 631 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 CAPN10Q9HC96 672 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 IP6K2Q9UHH9 426 aa16.73■□□□□ 0.27
PABPC1-221ENST00000522720 ASCC3Q8N3C0 2202 aaKnown RBP16.73■□□□□ 0.27
PABPC1-221ENST00000522720 ADAMTS9Q9P2N4 1935 aa16.72■□□□□ 0.27
PABPC1-221ENST00000522720 C1QTNF3-AMACRE9PGA6 284 aa16.72■□□□□ 0.27
PABPC1-221ENST00000522720 CDX4O14627 284 aaPredicted RBP16.72■□□□□ 0.27
PABPC1-221ENST00000522720 CHRNA3P32297 505 aa16.72■□□□□ 0.27
PABPC1-221ENST00000522720 DRD3P35462 400 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms