RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 UQCRBP14927 111 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 BRCC3P46736 316 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 MRPS5P82675 430 aaKnown RBP16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 DDR2Q16832 855 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 HSDL1Q3SXM5 330 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 AFTPHQ6ULP2 937 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 ABHD15Q6UXT9 468 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 FAM126BQ8IXS8 530 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 RSPH1Q8WYR4 309 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 SMG7Q92540 1137 aaKnown RBP16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 SEMA3CQ99985 751 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 ZNF670Q9BS34 389 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 ETNK2Q9NVF9 386 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 MAP10Q9P2G4 905 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 SAE1Q9UBE0 346 aaPredicted RBP16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 ASTN1O14525 1302 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 ABCB1P08183 1280 aaPredicted RBP16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 MATKP42679 507 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 RXRGP48443 463 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 SPIDRQ14159 915 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 GRM3Q14832 879 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 KCNA10Q16322 511 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 CES3Q6UWW8 571 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 CCDC81Q6ZN84 652 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 SHC3Q92529 594 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 DNAJC19Q96DA6 116 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 APOPT1Q96IL0 206 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 TMEM237Q96Q45 408 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 NXF3Q9H4D5 531 aaKnown RBP16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 ZSCAN32Q9NX65 697 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 KIAA1522Q9P206 1035 aaPredicted RBP16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 A0A1B0GW55 424 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 MOXD2PA6NHM9 499 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 SCAMP3O14828 347 aaKnown RBP16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 CHADO15335 359 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 MT-CO1P00395 513 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 HNRNPCP07910 306 aaKnown RBP eCLIP16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 UBTFL6P0CB48 400 aaPredicted RBP16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 DUX4L2P0CJ85 424 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 DUX4L3P0CJ86 424 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 DUX4L4P0CJ87 422 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 DUX4L5P0CJ88 424 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 DUX4L6P0CJ89 424 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 DUX4L7P0CJ90 424 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 NTSP30990 170 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 AIF1P55008 147 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 CPA6Q8N4T0 437 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 ATG16L2Q8NAA4 619 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 HGH1Q9BTY7 390 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 THAP1Q9NVV9 213 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 DUX4Q9UBX2 424 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 AP4S1Q9Y587 144 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 SNX13Q9Y5W8 968 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 MEI4A8MW99 385 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 RIPK2O43353 540 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 ATP6V1B2P21281 511 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 SSTR1P30872 391 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 VAC14Q08AM6 782 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 ZNF786Q8N393 782 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 BSNDQ8WZ55 320 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 NDUFAF1Q9Y375 327 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 MAGEA13PA6NCF6 341 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 URADA6NGE7 173 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 E7ENQ6 273 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 CACNB4O00305 520 aaPredicted RBP16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 OPLAHO14841 1288 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 SGTAO43765 313 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 FYNP06241 537 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 NAA20P61599 178 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 NCF4Q15080 339 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 STXBP5Q5T5C0 1151 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 KCTD14Q9BQ13 255 aaPredicted RBP16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 SIKE1Q9BRV8 207 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 NDUFA13Q9P0J0 144 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 ARHGAP28Q9P2N2 729 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 ENOPH1Q9UHY7 261 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 ZNF711Q9Y462 761 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 FKBP6O75344 327 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 SLC1A6P48664 564 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 ITGB3BPQ13352 177 aaPredicted RBP16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 PHF13Q86YI8 300 aaPredicted RBP16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 OR5B17Q8NGF7 314 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 SPPL2AQ8TCT8 520 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 DNAJC1Q96KC8 554 aaKnown RBP16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 DNAJC18Q9H819 358 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 DEC1Q9P2X7 70 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 PADI3Q9ULW8 664 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 CAB39Q9Y376 341 aaPredicted RBP16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 GPSM3Q9Y4H4 160 aa16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 MRPL42Q9Y6G3 142 aaKnown RBP16.47■□□□□ 0.23
PCDHA3-201ENST00000522353 C15orf38-AP3S2A0A0A6YYH1 394 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 SP100P23497 879 aaPredicted RBP16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 PSMB4P28070 264 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 TRIP4Q15650 581 aaPredicted RBP16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 C9orf57Q5W0N0 161 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 CYB5D1Q6P9G0 228 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 ARPINQ7Z6K5 226 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 KIAA2013Q8IYS2 634 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 RNF157Q96PX1 679 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms