RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 CLRN2A0PK11 232 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 CLCA1A8K7I4 914 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 TCP10L2B9ZVM9 353 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 HIP1O00291 1037 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 INPPL1O15357 1258 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 INSIG1O15503 277 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 KCNAB3O43448 404 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 PQBP1O60828 265 aaKnown RBP3.63□□□□□ -1.83
VPS13B-209ENST00000521559 ENTPD3O75355 529 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 WDHD1O75717 1129 aaPredicted RBP3.63□□□□□ -1.83
VPS13B-209ENST00000521559 MBD4O95243 580 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 SLC3A2P08195 630 aaKnown RBP3.63□□□□□ -1.83
VPS13B-209ENST00000521559 SNHG28P0DPA3 235 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 MMP8P22894 467 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 CHMLP26374 656 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 ATICP31939 592 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 ME1P48163 572 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 SLC12A2P55011 1212 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 HTRA4P83105 476 aaPredicted RBP3.63□□□□□ -1.83
VPS13B-209ENST00000521559 CFHR1Q03591 330 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 SLC14A1Q13336 389 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 PICALMQ13492 652 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 TNFAIP1Q13829 316 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 ACOX1Q15067 660 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 MCMDC2Q4G0Z9 681 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 FAXCQ5TGI0 409 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 TLDC1Q6P9B6 456 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 TECPR1Q7Z6L1 1165 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 PIM3Q86V86 326 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 APOBEC3FQ8IUX4 373 aaKnown RBP3.63□□□□□ -1.83
VPS13B-209ENST00000521559 UEVLDQ8IX04 471 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 TEX11Q8IYF3 940 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 MIGA1Q8NAN2 632 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 SUN3Q8TAQ9 357 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 FAM151AQ8WW52 585 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 RUFY2Q8WXA3 655 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 RIOK1Q9BRS2 568 aaKnown RBP3.63□□□□□ -1.83
VPS13B-209ENST00000521559 SARGQ9BW04 601 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 IDI2Q9BXS1 227 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 MAGEB5Q9BZ81 275 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 GLIS2Q9BZE0 524 aaPredicted RBP3.63□□□□□ -1.83
VPS13B-209ENST00000521559 CRNKL1Q9BZJ0 848 aaKnown RBP3.63□□□□□ -1.83
VPS13B-209ENST00000521559 DEFB129Q9H1M3 183 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 VEZTQ9HBM0 779 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 RXFP3Q9NSD7 469 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 DIAPH3Q9NSV4 1193 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 ATP8A2Q9NTI2 1148 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 GGA3Q9NZ52 723 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 FAM50BQ9Y247 325 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 HS3ST3B1Q9Y662 390 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 ARFGEF1Q9Y6D6 1849 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 RFX7Q2KHR2 1363 aa3.63□□□□□ -1.83
VPS13B-209ENST00000521559 TAF1P21675 1872 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 FER1L6Q2WGJ9 1857 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 A0A0D9SFI3 127 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 KRTAP29-1A8MX34 341 aaPredicted RBP3.62□□□□□ -1.83
VPS13B-209ENST00000521559 F8W8V4 182 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 ADAM10O14672 748 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 GPAA1O43292 621 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 CA12O43570 354 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 PRKAB2O43741 272 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 CNOT3O75175 753 aaKnown RBP3.62□□□□□ -1.83
VPS13B-209ENST00000521559 PEX14O75381 377 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 MYL4P12829 197 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 PRF1P14222 555 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 MATN1P21941 496 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 HOXD9P28356 352 aaPredicted RBP3.62□□□□□ -1.83
VPS13B-209ENST00000521559 DUSP1P28562 367 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 GALNSP34059 522 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 HTR7P34969 479 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 CPA2P48052 419 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 WDR5P61964 334 aaKnown RBP3.62□□□□□ -1.83
VPS13B-209ENST00000521559 SRSF1Q07955 248 aaKnown RBP eCLIP3.62□□□□□ -1.83
VPS13B-209ENST00000521559 TCP10Q12799 353 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 GPS1Q13098 491 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 MTAPQ13126 283 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 FHL1Q13642 323 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 KCNJ12Q14500 433 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 KPNB1Q14974 876 aaKnown RBP3.62□□□□□ -1.83
VPS13B-209ENST00000521559 SEC23BQ15437 767 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 ALX1Q15699 326 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 CNGA3Q16281 694 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 MRNIPQ6NTE8 343 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 CASC1Q6TDU7 716 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 CWC27Q6UX04 472 aaKnown RBP3.62□□□□□ -1.83
VPS13B-209ENST00000521559 CCDC129Q6ZRS4 1044 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 FOXP4Q8IVH2 680 aaPredicted RBP3.62□□□□□ -1.83
VPS13B-209ENST00000521559 ARFGAP1Q8N6T3 406 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 PJA1Q8NG27 643 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 OVCA2Q8WZ82 227 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 ZFYVE19Q96K21 471 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 SEC62Q99442 399 aaKnown RBP3.62□□□□□ -1.83
VPS13B-209ENST00000521559 COLEC11Q9BWP8 271 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 APOL5Q9BWW9 433 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 FOXP1Q9H334 677 aaPredicted RBP3.62□□□□□ -1.83
VPS13B-209ENST00000521559 DDX4Q9NQI0 724 aaKnown RBP3.62□□□□□ -1.83
VPS13B-209ENST00000521559 VPS45Q9NRW7 570 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 TMEM184CQ9NVA4 438 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 SEMA5BQ9P283 1151 aa3.62□□□□□ -1.83
VPS13B-209ENST00000521559 CORO2BQ9UQ03 480 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms