RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 TXKP42681 527 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 ACOT2P49753 483 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 SGSHP51688 502 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 SLC5A3P53794 718 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 PMS2P54278 862 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 ADKP55263 362 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 ADAM9Q13443 819 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 ART3Q13508 389 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 BMT2Q1RMZ1 405 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 ZNF284Q2VY69 593 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 AGBL4Q5VU57 503 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 CEP135Q66GS9 1140 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 SLC6A19Q695T7 634 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 PAQR9Q6ZVX9 377 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 STK40Q8N2I9 435 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 TMEM86AQ8N2M4 240 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 CISD2Q8N5K1 135 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 BEND7Q8N7W2 519 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 Q8N9G6 341 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 C1orf127Q8N9H9 656 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 RCBTB1Q8NDN9 531 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 PDZD8Q8NEN9 1154 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 MYCBPAPQ8TBZ2 947 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 ITLN2Q8WWU7 325 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 NRGNQ92686 78 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 RNF31Q96EP0 1072 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 TSPAN18Q96SJ8 248 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 BARD1Q99728 777 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 CMKLR1Q99788 373 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 RNF26Q9BY78 433 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 CXXC4Q9H2H0 198 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 IKZF4Q9H2S9 585 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 DPEP3Q9H4B8 488 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 NCOA5Q9HCD5 579 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 GPAMQ9HCL2 828 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 TUFT1Q9NNX1 390 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 SEMA3GQ9NS98 782 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 GDAP2Q9NXN4 497 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 NCKIPSDQ9NZQ3 722 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 RCOR3Q9P2K3 495 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 SUN2Q9UH99 717 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 SIX4Q9UIU6 781 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 GGT7Q9UJ14 662 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 INTS6Q9UL03 887 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 AGO1Q9UL18 857 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 PLA2G4CQ9UP65 541 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 AGAP1Q9UPQ3 857 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 NAALADL1Q9UQQ1 740 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 C2CD2Q9Y426 696 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 PCDHA5Q9Y5H7 936 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 SNX9Q9Y5X1 595 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 TLN2Q9Y4G6 2542 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 SPTY2D1-AS1A0A0U1RR47 76 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 RNF103O00237 685 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 RAD51BO15315 384 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 HUS1O60921 280 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 CPA1P15085 419 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 VAV1P15498 845 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 PCSK1P29120 753 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 NOS2P35228 1153 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 SOX11P35716 441 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 MATR3P43243 847 aaKnown RBP eCLIP7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 LHX1P48742 406 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 ARID5AQ03989 594 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 ZNF630Q2M218 657 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 ADCK5Q3MIX3 580 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 TSGA10IPQ3SY00 556 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 CRTC2Q53ET0 693 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 CRB2Q5IJ48 1285 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 PAPD7Q5XG87 772 aaKnown RBP7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 CPZQ66K79 652 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 CREB3L3Q68CJ9 461 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 CRELD2Q6UXH1 353 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 PARS2Q7L3T8 475 aaKnown RBP7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 LRRN4CLQ8ND94 238 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 ZSWIM2Q8NEG5 633 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 ZMIZ2Q8NF64 920 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 ART4Q93070 314 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 TAAR9Q96RI9 348 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 LRRC61Q9BV99 259 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 SLC2A11Q9BYW1 496 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 LSG1Q9H089 658 aaKnown RBP7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 EHD2Q9NZN4 543 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 GULP1Q9UBP9 304 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 GDF2Q9UK05 429 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 LSM7Q9UK45 103 aaKnown RBP7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 CDH9Q9ULB4 789 aa7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 NAP1L2Q9ULW6 460 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 ZFR2Q9UPR6 939 aaKnown RBP7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 RBM19Q9Y4C8 960 aaKnown RBP7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 KLF2Q9Y5W3 355 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-216ENST00000519489 ANKRD63C9JTQ0 380 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 RNGTTO60942 597 aaKnown RBP7□□□□□ -1.29
CTNNA1-216ENST00000519489 BEST1O76090 585 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 PABPC1P11940 636 aaKnown RBP7□□□□□ -1.29
CTNNA1-216ENST00000519489 IFNAR1P17181 557 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 C5AR1P21730 350 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 MSX1P28360 303 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 HTR1EP28566 365 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms