RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 LY6G6EA0A0G2JKS1 128 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 GOLGA6L10A0A0M3HER8 536 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 OR6C68A6NDL8 312 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 GAGE12JA6NER3 117 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 ATG13O75143 517 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 DDAH2O95865 285 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 CHRM4P08173 479 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 IFIT1P09914 478 aaKnown RBP3.99□□□□□ -1.77
VPS13B-207ENST00000518569 PRF1P14222 555 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 XBP1P17861 261 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 KLRC2P26717 231 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 PGM1P36871 562 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 SKIV2L2P42285 1042 aaKnown RBP3.99□□□□□ -1.77
VPS13B-207ENST00000518569 ME1P48163 572 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 ALDH7A1P49419 539 aaKnown RBP3.99□□□□□ -1.77
VPS13B-207ENST00000518569 PLCD1P51178 756 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 LAMB3Q13751 1172 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 IL13RA2Q14627 380 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 INPP5JQ15735 1006 aaPredicted RBP3.99□□□□□ -1.77
VPS13B-207ENST00000518569 ETFDHQ16134 617 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 AP5B1Q2VPB7 878 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 ZKSCAN2Q63HK3 967 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 ZNF425Q6IV72 752 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 LVRNQ6Q4G3 990 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 CCDC25Q86WR0 208 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 SLC25A41Q8N5S1 370 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 SETD9Q8NE22 299 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 STAMQ92783 540 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 EME1Q96AY2 570 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 NAF1Q96HR8 494 aaKnown RBP3.99□□□□□ -1.77
VPS13B-207ENST00000518569 SLC29A3Q9BZD2 475 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 GPR63Q9BZJ6 419 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 PNRC2Q9NPJ4 139 aaKnown RBP3.99□□□□□ -1.77
VPS13B-207ENST00000518569 DECR2Q9NUI1 292 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 ZDHHC7Q9NXF8 308 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 GRHL1Q9NZI5 618 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 SLC4A4Q9Y6R1 1079 aa3.99□□□□□ -1.77
VPS13B-207ENST00000518569 EYA2O00167 538 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 SOCS2O14508 198 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 RNMTO43148 476 aaKnown RBP3.98□□□□□ -1.77
VPS13B-207ENST00000518569 TMCC1O94876 653 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 IFNA2P01563 188 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 KLKB1P03952 638 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 CYP19A1P11511 503 aaPredicted RBP3.98□□□□□ -1.77
VPS13B-207ENST00000518569 PTGER1P34995 402 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 ZNF81P51508 661 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 HNRNPA0Q13151 305 aaKnown RBP3.98□□□□□ -1.77
VPS13B-207ENST00000518569 MAPK7Q13164 816 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 PKP1Q13835 747 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 BAK1Q16611 211 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 ENTPD8Q5MY95 495 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 SH2D4BQ5SQS7 431 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 INTS11Q5TA45 600 aaKnown RBP3.98□□□□□ -1.77
VPS13B-207ENST00000518569 ASPHD1Q5U4P2 390 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 MMS22LQ6ZRQ5 1243 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 WDR5BQ86VZ2 330 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 ZDHHC23Q8IYP9 409 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 MMP21Q8N119 569 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 DPP10Q8N608 796 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 RFWD2Q8NHY2 731 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 ZCCHC10Q8TBK6 192 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 RAB40AQ8WXH6 277 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 HTRA1Q92743 480 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 HVCN1Q96D96 273 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 CLSTN3Q9BQT9 956 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 PHF7Q9BWX1 381 aaPredicted RBP3.98□□□□□ -1.77
VPS13B-207ENST00000518569 SPRTNQ9H040 489 aaPredicted RBP3.98□□□□□ -1.77
VPS13B-207ENST00000518569 FZD3Q9NPG1 666 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 ALKBH4Q9NXW9 302 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 HDAC6Q9UBN7 1215 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 CNOT7Q9UIV1 285 aaKnown RBP3.98□□□□□ -1.77
VPS13B-207ENST00000518569 TBX20Q9UMR3 447 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 CNPY2Q9Y2B0 182 aa3.98□□□□□ -1.77
VPS13B-207ENST00000518569 C17orf102A2RUQ5 167 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 GAGE10A6NGK3 116 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 INO80B-WBP1J3KQ70 363 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 MDM4O15151 490 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 ZC3H11AO75152 810 aaKnown RBP eCLIP3.97□□□□□ -1.77
VPS13B-207ENST00000518569 EPN2O95208 641 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 SERPINC1P01008 464 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 MYZAPP0CAP1 466 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 CHRNB1P11230 501 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 TBXAS1P24557 533 aaPredicted RBP3.97□□□□□ -1.77
VPS13B-207ENST00000518569 NR4A2P43354 598 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 CLCNKBP51801 687 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 POU5F1BQ06416 359 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 RABEP1Q15276 862 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 RPE65Q16518 533 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 SLC18A3Q16572 532 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 MANEAQ5SRI9 462 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 NAPEPLDQ6IQ20 393 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 B4GALNT4Q76KP1 1039 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 TRAPPC11Q7Z392 1133 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 ESX1Q8N693 406 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 TSPYL6Q8N831 410 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 ZNF366Q8N895 744 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 KDM1BQ8NB78 822 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 TNIP2Q8NFZ5 429 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 BICD2Q8TD16 824 aa3.97□□□□□ -1.77
VPS13B-207ENST00000518569 NOC3LQ8WTT2 800 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms