RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 SGIP1Q9BQI5 828 aa6.79□□□□□ -1.32
CDH12-203ENST00000517378 ACE2Q9BYF1 805 aaPredicted RBP6.79□□□□□ -1.32
CDH12-203ENST00000517378 RHOJQ9H4E5 214 aa6.79□□□□□ -1.32
CDH12-203ENST00000517378 CYP4F11Q9HBI6 524 aa6.79□□□□□ -1.32
CDH12-203ENST00000517378 MRM3Q9HC36 420 aaKnown RBP6.79□□□□□ -1.32
CDH12-203ENST00000517378 ANLNQ9NQW6 1124 aa6.79□□□□□ -1.32
CDH12-203ENST00000517378 RRN3Q9NYV6 651 aa6.79□□□□□ -1.32
CDH12-203ENST00000517378 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.79□□□□□ -1.32
CDH12-203ENST00000517378 RGS17Q9UGC6 210 aaPredicted RBP6.79□□□□□ -1.32
CDH12-203ENST00000517378 FBXW11Q9UKB1 542 aa6.79□□□□□ -1.32
CDH12-203ENST00000517378 COMMD3-BMI1R4GMX3 469 aa6.79□□□□□ -1.32
CDH12-203ENST00000517378 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.78□□□□□ -1.32
CDH12-203ENST00000517378 SMIM31A0A1B0GVY4 71 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 PSMD3O43242 534 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 GRID2O43424 1007 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 RTN3O95197 1032 aaPredicted RBP6.78□□□□□ -1.32
CDH12-203ENST00000517378 SNAI1O95863 264 aaPredicted RBP6.78□□□□□ -1.32
CDH12-203ENST00000517378 HSPA1AP0DMV8 641 aaKnown RBP6.78□□□□□ -1.32
CDH12-203ENST00000517378 HSPA1BP0DMV9 641 aaKnown RBP6.78□□□□□ -1.32
CDH12-203ENST00000517378 MPSTP25325 297 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 GRIA2P42262 883 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 PSMD8P48556 350 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 TPI1P60174 286 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 PRKAA1Q13131 559 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 PEX6Q13608 980 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 ITGA7Q13683 1181 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 PDK3Q15120 406 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 DLG2Q15700 870 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 DGKDQ16760 1214 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 ZNF423Q2M1K9 1284 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 HSP90AA5PQ58FG0 334 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 UBXN11Q5T124 520 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 ARMC3Q5W041 872 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 SEL1L3Q68CR1 1132 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 KYQ8NBH2 561 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 NETO2Q8NC67 525 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 CATSPER1Q8NEC5 780 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 PDCD6IPQ8WUM4 868 aaKnown RBP6.78□□□□□ -1.32
CDH12-203ENST00000517378 NDRG1Q92597 394 aaKnown RBP6.78□□□□□ -1.32
CDH12-203ENST00000517378 DLG3Q92796 817 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 OPTNQ96CV9 577 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 MFSD3Q96ES6 412 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 MAELQ96JY0 434 aaKnown RBP6.78□□□□□ -1.32
CDH12-203ENST00000517378 TSGA13Q96PP4 275 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 CAB39LQ9H9S4 337 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 CDHR5Q9HBB8 845 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 PLK2Q9NYY3 685 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 NDUFA13Q9P0J0 144 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 RIMS3Q9UJD0 308 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 LOC100653049A0A140TA62 436 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 HUS1O60921 280 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 KRT34O76011 436 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 CHRNGP07510 517 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 SLC35E2BP0CK96 405 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 SMIM18P0DKX4 95 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 SMPD1P17405 629 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 PTPN1P18031 435 aaKnown RBP6.78□□□□□ -1.32
CDH12-203ENST00000517378 AKAP5P24588 427 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 SERPINB6P35237 376 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 SERPINB5P36952 375 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 ALDH1A3P47895 512 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 NUDT2P50583 147 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 DAOAP59103 153 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 LILRA4P59901 499 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 CDH17Q12864 832 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 ADGRE1Q14246 886 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 TRIP10Q15642 601 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 USP41Q3LFD5 358 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 LSM12Q3MHD2 195 aaKnown RBP6.78□□□□□ -1.32
CDH12-203ENST00000517378 MMEL1Q495T6 779 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 CERCAMQ5T4B2 595 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 NAPEPLDQ6IQ20 393 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 BNC2Q6ZN30 1099 aaPredicted RBP6.78□□□□□ -1.32
CDH12-203ENST00000517378 HFE2Q6ZVN8 426 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 BHLHA9Q7RTU4 235 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 TMC7Q7Z402 723 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 SIX6OS1Q8N1H7 587 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 CNTD1Q8N815 330 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 ICA1LQ8NDH6 482 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 ACVR1CQ8NER5 493 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 DCUN1D1Q96GG9 259 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 TEKT5Q96M29 485 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 PGLYRP2Q96PD5 576 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 SHCBP1LQ9BZQ2 653 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 LRRC4Q9HBW1 653 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 ZBTB26Q9HCK0 441 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 CNGB3Q9NQW8 809 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 MAN1C1Q9NR34 630 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 C20orf96Q9NUD7 363 aaPredicted RBP6.78□□□□□ -1.32
CDH12-203ENST00000517378 BCAP29Q9UHQ4 241 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 RAB26Q9ULW5 256 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 INPP5FQ9Y2H2 1132 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 DTNAQ9Y4J8 743 aa6.78□□□□□ -1.32
CDH12-203ENST00000517378 C15orf38-AP3S2A0A0A6YYH1 394 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.77□□□□□ -1.32
CDH12-203ENST00000517378 PRSS51A0A1B0GVH4 220 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 TK2O00142 265 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 CLDN5O00501 218 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 NRP1O14786 923 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 ATP9BO43861 1147 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms