RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 RIMS3Q9UJD0 308 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 SBF1O95248 1867 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 TSC2P49815 1807 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 MAGEB16A2A368 324 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 BEST1O76090 585 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 ADRA1BP35368 520 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 MSX2P35548 267 aaPredicted RBP17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 HK2P52789 917 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 LAMB3Q13751 1172 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 ADGRE1Q14246 886 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 GRM3Q14832 879 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 ANO4Q32M45 955 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 ZFP1Q6P2D0 407 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 PDZD4Q76G19 769 aaPredicted RBP17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 SETD3Q86TU7 594 aaPredicted RBP17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 B3GALNT2Q8NCR0 500 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 ADAM32Q8TC27 787 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 TNIP3Q96KP6 325 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 SLC2A13Q96QE2 648 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 GPR22Q99680 433 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 HNRNPABQ99729 332 aaKnown RBP17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 Q9H521 79 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 CLIC5Q9NZA1 410 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 ZDHHC2Q9UIJ5 367 aa17.11■□□□□ 0.33
TSPAN17-209ENST00000515708 ZNF189O75820 626 aaPredicted RBP17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 CABYRO75952 493 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 PGGT1BP53609 377 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 NAGLUP54802 743 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 PKNOX1P55347 436 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 SH3BGRP55822 239 aaPredicted RBP17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 PRKAA1Q13131 559 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 CEACAM7Q14002 265 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 TMEM198Q66K66 360 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 HFE2Q6ZVN8 426 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 PGAM4Q8N0Y7 254 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 NPWQ8N729 165 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 ZNF560Q96MR9 790 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 PRICKLE1Q96MT3 831 aaPredicted RBP17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 EPAS1Q99814 870 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 IL22Q9GZX6 179 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 ADAMTS10Q9H324 1103 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 ANLNQ9NQW6 1124 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 TLK1Q9UKI8 766 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 RAB26Q9ULW5 256 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 ANKRD6Q9Y2G4 727 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 I6L893 689 aaPredicted RBP17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 CLDN5O00501 218 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 NCAM2O15394 837 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 CRTAMO95727 393 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 CD4P01730 458 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 NPR3P17342 541 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 TPH1P17752 444 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 ADSLP30566 484 aaPredicted RBP17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 HADHAP40939 763 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 NPY2RP49146 381 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 MS4A2Q01362 244 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 NSUN2Q08J23 767 aaKnown RBP eCLIP17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 ZBTB17Q13105 803 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 SEMA3BQ13214 749 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 NOTUMQ6P988 496 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 LIMS2Q7Z4I7 341 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 ZC3HC1Q86WB0 502 aaKnown RBP17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 TICAM1Q8IUC6 712 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 CATSPER2Q96P56 530 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 PCDHGB4Q9UN71 923 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 CDYLQ9Y232 598 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 PCDHGB5Q9Y5G0 923 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 RAD54BQ9Y620 910 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 PCNTO95613 3336 aa17.1■□□□□ 0.33
TSPAN17-209ENST00000515708 SMIM28A0A1B0GU29 152 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 CXCL11O14625 94 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 CFLARO15519 480 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 PHGDHO43175 533 aaKnown RBP17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 JUNP05412 331 aaKnown RBP17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 TFAP2AP05549 437 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 CYP2C9P11712 490 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 ENO3P13929 434 aaPredicted RBP17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 NFKB1P19838 968 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 SAT1P21673 171 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 NMBRP28336 390 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 DPP6P42658 865 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 RPL5P46777 297 aaKnown RBP17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 GLRBP48167 497 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 PRKAA2P54646 552 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 TPI1P60174 286 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 TBC1D25Q3MII6 688 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 LILRA2Q8N149 483 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 SIX6OS1Q8N1H7 587 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 RNF148Q8N7C7 305 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 BHLHE22Q8NFJ8 381 aaPredicted RBP17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 USP13Q92995 863 aaPredicted RBP17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 NMD3Q96D46 503 aaKnown RBP17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 DGCR14Q96DF8 476 aaKnown RBP17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 SLC9A7Q96T83 725 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 DNAI2Q9GZS0 605 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 COPS7BQ9H9Q2 264 aaPredicted RBP17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 WDR41Q9HAD4 459 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 GOLGA2P5Q9HBQ8 144 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 LRRC4Q9HBW1 653 aa17.09■□□□□ 0.33
TSPAN17-209ENST00000515708 VTI1BQ9UEU0 232 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms