RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 LINC01465Q8N7H1 131 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 C8orf58Q8NAV2 365 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 CLEC4CQ8WTT0 213 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 UBE2Q2Q8WVN8 375 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 NCSTNQ92542 709 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 USP6NLQ92738 828 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 ELP4Q96EB1 424 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 EDC3Q96F86 508 aaKnown RBP3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 HMCESQ96FZ2 354 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 PRR11Q96HE9 360 aaPredicted RBP3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 FCRL4Q96PJ5 515 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 ELOVL1Q9BW60 279 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 ITPAQ9BY32 194 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 CIPCQ9C0C6 399 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 PRSS22Q9GZN4 317 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 CLPBQ9H078 707 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 RANBP17Q9H2T7 1088 aaKnown RBP3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 MROH8Q9H579 483 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 WDR26Q9H7D7 661 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 SFXN1Q9H9B4 322 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 BRF2Q9HAW0 419 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 PLSCR4Q9NRQ2 329 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 ZDHHC7Q9NXF8 308 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 MTMR4Q9NYA4 1195 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 MPP6Q9NZW5 540 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 SEMA5BQ9P283 1151 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 KLQ9UEF7 1012 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 TBC1D29Q9UFV1 150 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 SARDHQ9UL12 918 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 FZD4Q9ULV1 537 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 CAMK2AQ9UQM7 478 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 PCDHB2Q9Y5E7 798 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 PSAT1Q9Y617 370 aa3.7□□□□□ -1.82
CALCOCO2-223ENST00000514267 RB1CC1Q8TDY2 1594 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 NPIPB15A6NHN6 443 aaPredicted RBP3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 NPIPB13A6NJU9 1138 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 C16orf96A6NNT2 1141 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 NPIPB5A8MRT5 1133 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 B4DLN1 442 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 NPIPB4C9JG80 1138 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 AP3D1O14617 1153 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 AHCYL1O43865 530 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 PRAMEF2O60811 474 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 MBPP02686 304 aaPredicted RBP3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 CYP4B1P13584 511 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 COX7A2P14406 83 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 ARSAP15289 507 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 HOXB9P17482 250 aaPredicted RBP3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 CDH2P19022 906 aaPredicted RBP3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 PRPH2P23942 346 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 GALNSP34059 522 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 HNF1BP35680 557 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 RPS3AP61247 264 aaKnown RBP3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 RAE1P78406 368 aaKnown RBP3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 ARHGAP8P85298 464 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 HNRNPA0Q13151 305 aaKnown RBP3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 TWIST1Q15672 202 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 RILPL1Q5EBL4 403 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 CFAP58Q5T655 872 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 GJB7Q6PEY0 223 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 KIAA1324Q6UXG2 1013 aaKnown RBP3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 KYAT3Q6YP21 454 aaKnown RBP3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 ENOSF1Q7L5Y1 443 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 RRM2BQ7LG56 351 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 DDB2Q92466 427 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 CCDC17Q96LX7 622 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 EYA3Q99504 573 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 USP44Q9H0E7 712 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 SLC25A18Q9H1K4 315 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 TTC12Q9H892 705 aaPredicted RBP3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 USP29Q9HBJ7 922 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 HCFC1R1Q9NWW0 138 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 PIAS3Q9Y6X2 628 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 WDR17Q8IZU2 1322 aa3.69□□□□□ -1.82
CALCOCO2-223ENST00000514267 COL3A1P02461 1466 aaPredicted RBP3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 A0A1W2PQM1 296 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 EXOC3O60645 756 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 MOSPD3O75425 235 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 CHRM4P08173 479 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 CYP2D6P10635 497 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 ITGB6P18564 788 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 SFPQP23246 707 aaKnown RBP eCLIP3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 TM4SF1P30408 202 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 AVPR2P30518 371 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 GJC1P36383 396 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 PSMB10P40306 273 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 MTNR1AP48039 350 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 HARS2P49590 506 aaKnown RBP3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 AGTR2P50052 363 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 CREB5Q02930 508 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 LMAN2Q12907 356 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 EPS8Q12929 822 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 DCTN2Q13561 401 aaKnown RBP3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 ZNF268Q14587 947 aaPredicted RBP3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 WTAPQ15007 396 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 CNGA3Q16281 694 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 GXYLT1Q4G148 440 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 MFSD4BQ5TF39 518 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 C11orf87Q6NUJ2 197 aa3.68□□□□□ -1.82
CALCOCO2-223ENST00000514267 AADACL2Q6P093 401 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms