RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ENC1O14682 589 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 APOL1O14791 398 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 CD160O95971 181 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 ASLP04424 464 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 ATP5BP06576 529 aaKnown RBP10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 EPHX1P07099 455 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 PYGMP11217 842 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 SRCP12931 536 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 HCAR3P49019 387 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 PEX5P50542 639 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 ZNF135P52742 658 aaPredicted RBP10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 PLK1P53350 603 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 RWDD2BP57060 319 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 SLC12A1Q13621 1099 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 PARP15Q460N3 678 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 ACCSLQ4AC99 568 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 ZNF569Q5MCW4 686 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 EOGTQ5NDL2 527 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 AFMIDQ63HM1 303 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 HEATR6Q6AI08 1181 aaKnown RBP10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 ANO7Q6IWH7 933 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 ZNF783Q6ZMS7 281 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 MAP7D3Q8IWC1 876 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 MAML2Q8IZL2 1156 aaPredicted RBP10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 SYNPOQ8N3V7 929 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 SPEM1Q8N4L4 309 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 PLD5Q8N7P1 536 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 ATP11CQ8NB49 1132 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 ACDQ96AP0 544 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 HES6Q96HZ4 224 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 RBM41Q96IZ5 413 aaKnown RBP10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 EXOC2Q96KP1 924 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 TM6SF2Q9BZW4 377 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 MAGEH1Q9H213 219 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 TMEM245Q9H330 911 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 SP110Q9HB58 689 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 PDFQ9HBH1 243 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 CD93Q9NPY3 652 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 SAE1Q9UBE0 346 aaPredicted RBP10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 HEY1Q9Y5J3 304 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 TCRBV7S2A1N4TA0A589 114 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 ARHGAP42A6NI28 874 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 CHURC1-FNTBB4DL54 471 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 K7ESF4 209 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 LAMTOR5O43504 91 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 KDELR3O43731 214 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 CST8O60676 142 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 SIN3BO75182 1162 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 TMCC1O94876 653 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 ZRANB2O95218 330 aaKnown RBP eCLIP10□□□□□ -0.81
TOPBP1-209ENST00000513818 SERPINB6P35237 376 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 ETFBP38117 255 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 CXCL12P48061 93 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 SERPINH1P50454 418 aaKnown RBP10□□□□□ -0.81
TOPBP1-209ENST00000513818 CCR3P51677 355 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 NDST2P52849 883 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 YBEYP58557 167 aaPredicted RBP10□□□□□ -0.81
TOPBP1-209ENST00000513818 ST8SIA6P61647 398 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 SLC10A2Q12908 348 aaPredicted RBP10□□□□□ -0.81
TOPBP1-209ENST00000513818 SERINC3Q13530 473 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 PAFAH1B3Q15102 231 aaKnown RBP10□□□□□ -0.81
TOPBP1-209ENST00000513818 RPS6KA1Q15418 735 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 CRY1Q16526 586 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 TAZQ16635 292 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 MEI1Q5TIA1 1274 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 SLC9A4Q6AI14 798 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 C22orf39Q6P5X5 142 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 SYT13Q7L8C5 426 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 TRMT11Q7Z4G4 463 aaKnown RBP10□□□□□ -0.81
TOPBP1-209ENST00000513818 SH2D3CQ8N5H7 860 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 ATPAF2Q8N5M1 289 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 UBL4BQ8N7F7 174 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 TSTD1Q8NFU3 115 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 TRIM58Q8NG06 486 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 OR6K2Q8NGY2 324 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 EXD1Q8NHP7 514 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 GABRG3Q99928 467 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 MAK16Q9BXY0 300 aaKnown RBP10□□□□□ -0.81
TOPBP1-209ENST00000513818 CEP41Q9BYV8 373 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 OSBPL8Q9BZF1 889 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 TPSD1Q9BZJ3 242 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 PRMT8Q9NR22 394 aaPredicted RBP10□□□□□ -0.81
TOPBP1-209ENST00000513818 DTLQ9NZJ0 730 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 PLA2G4CQ9UP65 541 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 SLC8A2Q9UPR5 921 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 VPS13AQ96RL7 3174 aa10□□□□□ -0.81
TOPBP1-209ENST00000513818 MIF4GDA9UHW6 222 aaKnown RBP9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 RNF103O00237 685 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 KCNK3O14649 394 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 PRAMEF11O60813 436 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 ATG13O75143 517 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 GJB3O75712 270 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 ATP1A1P05023 1023 aaKnown RBP9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 SRPRAP08240 638 aaKnown RBP9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 NDUFV2P19404 249 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 GKP32189 559 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 CXCR5P32302 372 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 MAGEA9P43362 315 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 CSTF1Q05048 431 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms