RNA–Protein interactions for RNA: ENST00000512303.1

TRIO-219, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-219ENST00000512303 SMARCB1Q12824 385 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 TAF12Q16514 161 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 TAF3Q5VWG9 929 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 LYSMD4Q5XG99 296 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 ARHGAP17Q68EM7 881 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 FSTL4Q6MZW2 842 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 SLC36A4Q6YBV0 504 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 MON1BQ7L1V2 547 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 ARCQ7LC44 396 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 MAATS1Q7Z4T9 603 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 RASSF3Q86WH2 238 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 NIPA2Q8N8Q9 360 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 C3orf20Q8ND61 904 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 C1orf131Q8NDD1 294 aaKnown RBP7.21□□□□□ -1.26
TRIO-219ENST00000512303 RPLP0P6Q8NHW5 317 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 CYFIP2Q96F07 1278 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 PPP1R10Q96QC0 940 aaKnown RBP7.21□□□□□ -1.26
TRIO-219ENST00000512303 MMS19Q96T76 1030 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 FAM83CQ9BQN1 747 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 NUP85Q9BW27 656 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 UBXN6Q9BZV1 441 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 ZDHHC5Q9C0B5 715 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 MIR1-1HGQ9H1L0 117 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 C2orf42Q9NWW7 574 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 HESX1Q9UBX0 185 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 SUSD2Q9UGT4 822 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 FEZ2Q9UHY8 353 aaPredicted RBP7.21□□□□□ -1.26
TRIO-219ENST00000512303 RAB21Q9UL25 225 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 PCDHA3Q9Y5H8 950 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 ALG6Q9Y672 507 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 GREB1Q4ZG55 1949 aa7.21□□□□□ -1.26
TRIO-219ENST00000512303 COL4A3Q01955 1670 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 A0A0U1RQJ8 604 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 SIGLEC16A6NMB1 481 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 KCNK3O14649 394 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 NDC80O14777 642 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 RRP8O43159 456 aaKnown RBP7.2□□□□□ -1.26
TRIO-219ENST00000512303 PSTPIP1O43586 416 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 SPOPO43791 374 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 BUB1BO60566 1050 aaPredicted RBP7.2□□□□□ -1.26
TRIO-219ENST00000512303 ZNF189O75820 626 aaPredicted RBP7.2□□□□□ -1.26
TRIO-219ENST00000512303 PROSCO94903 275 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 SEC24AO95486 1093 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 IGHA1P01876 353 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 CFIP05156 583 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 SERPINF2P08697 491 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 ADH5P11766 374 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 CD19P15391 556 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 GNSP15586 552 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 CD58P19256 250 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 WARSP23381 471 aaKnown RBP7.2□□□□□ -1.26
TRIO-219ENST00000512303 CTNNA1P35221 906 aaKnown RBP7.2□□□□□ -1.26
TRIO-219ENST00000512303 RAD23BP54727 409 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 RWDD2BP57060 319 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 YWHAHQ04917 246 aaPredicted RBP7.2□□□□□ -1.26
TRIO-219ENST00000512303 CAMK2GQ13555 558 aaPredicted RBP7.2□□□□□ -1.26
TRIO-219ENST00000512303 MAPRE1Q15691 268 aaKnown RBP7.2□□□□□ -1.26
TRIO-219ENST00000512303 HADHQ16836 314 aaKnown RBP7.2□□□□□ -1.26
TRIO-219ENST00000512303 PREPLQ4J6C6 727 aaPredicted RBP7.2□□□□□ -1.26
TRIO-219ENST00000512303 GPR158Q5T848 1215 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 SEL1L2Q5TEA6 688 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 NAA35Q5VZE5 725 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 GLRX5Q86SX6 157 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 CDR2LQ86X02 465 aaPredicted RBP7.2□□□□□ -1.26
TRIO-219ENST00000512303 TRIM42Q8IWZ5 723 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 RHOT1Q8IXI2 618 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 SLC4A11Q8NBS3 891 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 SPATA4Q8NEY3 305 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 CD101Q93033 1021 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 ATP2A3Q93084 1043 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 C18orf8Q96DM3 657 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 HSFY1Q96LI6 401 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 HEXIM2Q96MH2 286 aaKnown RBP7.2□□□□□ -1.26
TRIO-219ENST00000512303 BBC3Q96PG8 261 aaPredicted RBP7.2□□□□□ -1.26
TRIO-219ENST00000512303 SPOCK3Q9BQ16 436 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 FRMD8P1Q9BZ68 369 aaPredicted RBP7.2□□□□□ -1.26
TRIO-219ENST00000512303 FAM129AQ9BZQ8 928 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 SNX25Q9H3E2 840 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 PRDM16Q9HAZ2 1276 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 GKN1Q9NS71 199 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.2□□□□□ -1.26
TRIO-219ENST00000512303 DDX56Q9NY93 547 aaKnown RBP7.2□□□□□ -1.26
TRIO-219ENST00000512303 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.2□□□□□ -1.26
TRIO-219ENST00000512303 EFR3BQ9Y2G0 817 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 RAXQ9Y2V3 346 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 YIPF1Q9Y548 306 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 SNX9Q9Y5X1 595 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 ITPR1Q14643 2758 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 BPTFQ12830 3046 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 F5P12259 2224 aa7.2□□□□□ -1.26
TRIO-219ENST00000512303 TEX51A0A1B0GUA7 166 aa7.19□□□□□ -1.26
TRIO-219ENST00000512303 A8MXQ7 604 aa7.19□□□□□ -1.26
TRIO-219ENST00000512303 O00370 1275 aa7.19□□□□□ -1.26
TRIO-219ENST00000512303 PODXLO00592 558 aa7.19□□□□□ -1.26
TRIO-219ENST00000512303 DCLK1O15075 740 aa7.19□□□□□ -1.26
TRIO-219ENST00000512303 OAZ2O95190 189 aa7.19□□□□□ -1.26
TRIO-219ENST00000512303 EGFP01133 1207 aa7.19□□□□□ -1.26
TRIO-219ENST00000512303 PF4P02776 101 aa7.19□□□□□ -1.26
TRIO-219ENST00000512303 H2AFXP16104 143 aaPredicted RBP7.19□□□□□ -1.26
TRIO-219ENST00000512303 GJA1P17302 382 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms