RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 FCRL2Q96LA5 508 aaPredicted RBP11.89□□□□□ -0.51
RNF4-216ENST00000511859 BMFQ96LC9 184 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 SERPINB11Q96P15 392 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 BOCQ9BWV1 1114 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 STRADBQ9C0K7 418 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 FZD3Q9NPG1 666 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 GPR27Q9NS67 375 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 KIAA1257Q9ULG3 409 aa11.89□□□□□ -0.51
RNF4-216ENST00000511859 FARP1Q9Y4F1 1045 aaPredicted RBP11.89□□□□□ -0.51
RNF4-216ENST00000511859 SCN8AQ9UQD0 1980 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 NTN3O00634 580 aaPredicted RBP11.88□□□□□ -0.51
RNF4-216ENST00000511859 MUSKO15146 869 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 CALUO43852 315 aaPredicted RBP11.88□□□□□ -0.51
RNF4-216ENST00000511859 PPP6R2O75170 966 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 PCDH8O95206 1070 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 LTFP02788 710 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 SYT1P21579 422 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 CASP1P29466 404 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 UGT1A5P35504 534 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 RABIFP47224 123 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 FOXK1P85037 733 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 CUL4BQ13620 913 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 FZD2Q14332 565 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 STK38Q15208 465 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 DLG2Q15700 870 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 PERM1Q5SV97 790 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 CRTC1Q6UUV9 634 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 RAB11FIP2Q7L804 512 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 PTAR1Q7Z6K3 402 aaPredicted RBP11.88□□□□□ -0.51
RNF4-216ENST00000511859 PARGQ86W56 976 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 JAMLQ86YT9 394 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 LGI2Q8N0V4 545 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 FAM26EQ8N5C1 309 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 UBA3Q8TBC4 463 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 RNF34Q969K3 372 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 SLC39A13Q96H72 371 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 CAAP1Q9H8G2 361 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 IPO11Q9UI26 975 aaKnown RBP11.88□□□□□ -0.51
RNF4-216ENST00000511859 SLC25A13Q9UJS0 675 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 TRAF3IP3Q9Y228 551 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 PCDHGA4Q9Y5G9 962 aa11.88□□□□□ -0.51
RNF4-216ENST00000511859 SPTLC2O15270 562 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 POLR2DO15514 142 aaKnown RBP11.87□□□□□ -0.51
RNF4-216ENST00000511859 TRIM49P0CI25 452 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 TRIM49CP0CI26 452 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 VDRP11473 427 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 PDGFRAP16234 1089 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 JUNDP17535 347 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 PDX1P52945 283 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 MCCD1P59942 119 aaPredicted RBP11.87□□□□□ -0.51
RNF4-216ENST00000511859 DEFB133Q30KQ1 61 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 KYAT3Q6YP21 454 aaKnown RBP11.87□□□□□ -0.51
RNF4-216ENST00000511859 KIAA0895Q8NCT3 520 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 FBXL13Q8NEE6 735 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 TMIEQ8NEW7 156 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 ZNF564Q8TBZ8 553 aaPredicted RBP11.87□□□□□ -0.51
RNF4-216ENST00000511859 LMX1AQ8TE12 382 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 SLC35F5Q8WV83 523 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 CCDC3Q9BQI4 270 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 SLC17A9Q9BYT1 436 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 ZSCAN16Q9H4T2 348 aaPredicted RBP11.87□□□□□ -0.51
RNF4-216ENST00000511859 MMRN2Q9H8L6 949 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 DYRK4Q9NR20 520 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 RAB20Q9NX57 234 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 SPASTQ9UBP0 616 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 ZFR2Q9UPR6 939 aaKnown RBP11.87□□□□□ -0.51
RNF4-216ENST00000511859 PCDHB11Q9Y5F2 797 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 CENPEQ02224 2701 aa11.87□□□□□ -0.51
RNF4-216ENST00000511859 POM121BA6NF01 834 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 F5H5T6 163 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 CUTAO60888 179 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 FBXO21O94952 628 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 CD19P15391 556 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 TACR2P21452 398 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 RPS21P63220 83 aaKnown RBP11.86□□□□□ -0.51
RNF4-216ENST00000511859 SRSF6Q13247 344 aaKnown RBP11.86□□□□□ -0.51
RNF4-216ENST00000511859 PKP1Q13835 747 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 NFIL3Q16649 462 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 TMEM259Q4ZIN3 620 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 TTC39BQ5VTQ0 682 aaPredicted RBP11.86□□□□□ -0.51
RNF4-216ENST00000511859 OR6B2Q6IFH4 312 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 ESRP1Q6NXG1 681 aaKnown RBP11.86□□□□□ -0.51
RNF4-216ENST00000511859 PMF1Q6P1K2 205 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 CCAR2Q8N163 923 aaKnown RBP11.86□□□□□ -0.51
RNF4-216ENST00000511859 SEMA4DQ92854 862 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 FEM1CQ96JP0 617 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 BTN2A3PQ96KV6 586 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 HSFY1Q96LI6 401 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 CCDC114Q96M63 670 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 FEM1AQ9BSK4 669 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 HDAC8Q9BY41 377 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 EPN3Q9H201 632 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 EXOC1Q9NV70 894 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 KLF15Q9UIH9 416 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 PADI4Q9UM07 663 aa11.86□□□□□ -0.51
RNF4-216ENST00000511859 TCAF2A6NFQ2 919 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 LMO7DNF2Z398 122 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 O00370 1275 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 KPNA3O00505 521 aaPredicted RBP11.85□□□□□ -0.51
RNF4-216ENST00000511859 KLRC4O43908 158 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms