RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 NUP62P37198 522 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 GMPSP49915 693 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 PDIA2Q13087 525 aaKnown RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 FAM98BQ52LJ0 330 aaKnown RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 C3P1Q6ZMU1 363 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 FAR1Q8WVX9 515 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 ZNF607Q96SK3 696 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 DPYSL5Q9BPU6 564 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 HOPXQ9BPY8 73 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 FAM126AQ9BYI3 521 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 DPH5Q9H2P9 285 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 PALMDQ9NP74 551 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 MRPL17Q9NRX2 175 aaKnown RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 CNOT1A5YKK6 2376 aaKnown RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 XPO1O14980 1071 aaKnown RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 MSH4O15457 936 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 GADD45BO75293 160 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 SERPINE1P05121 402 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 TCF7P36402 384 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 GUCY2FP51841 1108 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 ZNF280AP59817 542 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 GUCY1A3Q02108 690 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 KCNC3Q14003 757 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 CRYMQ14894 314 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 LDLRAP1Q5SW96 308 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 SHC4Q6S5L8 630 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 SPATA19Q7Z5L4 167 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 METTL16Q86W50 562 aaKnown RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 CACTIN-AS1Q8N1I8 211 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 SPATA13Q96N96 652 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 HDHD5Q9BXW7 423 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 SP140LQ9H930 580 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 LATS2Q9NRM7 1088 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 SLC39A10Q9ULF5 831 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 CLRN2A0PK11 232 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 KLRG2A4D1S0 409 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 ASS1P00966 412 aaKnown RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 C7P10643 843 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 VARSP26640 1264 aaKnown RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 PTPN9P43378 593 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 TWF1Q12792 350 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 PUS10Q3MIT2 529 aaKnown RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 TDRPQ86YL5 185 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 IPMKQ8NFU5 416 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 KLHDC4Q8TBB5 520 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 USP33Q8TEY7 942 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 RAB7BQ96AH8 199 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 IER2Q9BTL4 223 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 MYL10Q9BUA6 226 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 PUS3Q9BZE2 481 aaKnown RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 CYP39A1Q9NYL5 469 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 RAB21Q9UL25 225 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 ENTPD4Q9Y227 616 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 HEY1Q9Y5J3 304 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 SESN1Q9Y6P5 492 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 POLEQ07864 2286 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 RNF103-CHMP3A0A140T963 221 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 ABHD14A-ACY1A0A1B0GW23 586 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 GUCA1CO95843 209 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 SYF2O95926 243 aaKnown RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 PIGRP01833 764 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 ALPPL2P10696 532 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 EEF1B2P24534 225 aaKnown RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 COILP38432 576 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 MAGEA4P43358 317 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 CD151P48509 253 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 PSEN2P49810 448 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 AP3S2P59780 193 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 SLC6A3Q01959 620 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 SP140Q13342 867 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 GRIK4Q16099 956 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 ZBED8Q8IZ13 594 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 GALNT6Q8NCL4 622 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 OTUD7AQ8TE49 926 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 ASZ1Q8WWH4 475 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 FAM84AQ96KN4 292 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 ECSITQ9BQ95 431 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 TRIM31Q9BZY9 425 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 ZYG11BQ9C0D3 744 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 LMAN2LQ9H0V9 348 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 MANSC1Q9H8J5 431 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 IL1RAPQ9NPH3 570 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 ATXN10Q9UBB4 475 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 WDR47O94967 919 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 POLR2EP19388 210 aaKnown RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 S100A7P31151 101 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 VHLP40337 213 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 GRM5P41594 1212 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 RAP1GDS1P52306 607 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 IL2P60568 153 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 SGCGQ13326 291 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 HSF5Q4G112 596 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 BSPRYQ5W0U4 402 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 ANKRD40Q6AI12 368 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 CCNI2Q6ZMN8 369 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 CATSPERGQ6ZRH7 1159 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 MCUQ8NE86 351 aa5.01□□□□□ -1.61
PTPN13-209ENST00000511467 SYTL5Q8TDW5 730 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-209ENST00000511467 STON2Q8WXE9 905 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms