RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 TBC1D4O60343 1298 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 BANF1O75531 89 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 GCATO75600 419 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 RFPL1O75677 317 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 SERPINE1P05121 402 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 ALOX15P16050 662 aaPredicted RBP13.13□□□□□ -0.31
HMGB2-205ENST00000511316 FDFT1P37268 417 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 DEUP1Q05D60 604 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 MRPL58Q14197 206 aaKnown RBP13.13□□□□□ -0.31
HMGB2-205ENST00000511316 SKIV2LQ15477 1246 aaKnown RBP13.13□□□□□ -0.31
HMGB2-205ENST00000511316 LEXMQ3ZCV2 418 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 CYP4A22Q5TCH4 519 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 SLC9A4Q6AI14 798 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 DENND1BQ6P3S1 775 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 LILRA6Q6PI73 481 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 SYCE2Q6PIF2 218 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 MARK2Q7KZI7 788 aaKnown RBP13.13□□□□□ -0.31
HMGB2-205ENST00000511316 OR6Y1Q8NGX8 325 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 ACTRT2Q8TDY3 377 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 LZICQ8WZA0 190 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 TFAP2BQ92481 460 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 KIF12Q96FN5 646 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 CFAP36Q96G28 342 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 UROC1Q96N76 676 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 TSPAN18Q96SJ8 248 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 KLF6Q99612 283 aaPredicted RBP13.13□□□□□ -0.31
HMGB2-205ENST00000511316 CDCA3Q99618 268 aaPredicted RBP13.13□□□□□ -0.31
HMGB2-205ENST00000511316 CLSTN3Q9BQT9 956 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 THTPAQ9BU02 230 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 KLHL4Q9C0H6 718 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 XYLT2Q9H1B5 865 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 EIF2B3Q9NR50 452 aaKnown RBP13.13□□□□□ -0.31
HMGB2-205ENST00000511316 SLC38A7Q9NVC3 462 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 ETNK2Q9NVF9 386 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 CLDND1Q9NY35 253 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 TCRBV7S3A2A0A539 114 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 SPTLC1O15269 473 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 ADAM12O43184 909 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 STAU1O95793 577 aaKnown RBP13.12□□□□□ -0.31
HMGB2-205ENST00000511316 CST3P01034 146 aaPredicted RBP13.12□□□□□ -0.31
HMGB2-205ENST00000511316 C1QAP02745 245 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 PABPC4LP0CB38 370 aaKnown RBP13.12□□□□□ -0.31
HMGB2-205ENST00000511316 MX2P20592 715 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 KCNA5P22460 613 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 GARSP41250 739 aaKnown RBP13.12□□□□□ -0.31
HMGB2-205ENST00000511316 HSPA13P48723 471 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 BTKQ06187 659 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 SMTNL2Q2TAL5 461 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 USP41Q3LFD5 358 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 LIN52Q52LA3 116 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 HSP90AA5PQ58FG0 334 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 SETD3Q86TU7 594 aaPredicted RBP13.12□□□□□ -0.31
HMGB2-205ENST00000511316 NT5DC4Q86YG4 428 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 NDUFAF2Q8N183 169 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 ARFGAP1Q8N6T3 406 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 DTX3LQ8TDB6 740 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 UCMAQ8WVF2 138 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 HSPH1Q92598 858 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 AZIN2Q96A70 460 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 SERPINI1Q99574 410 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 GORASP1Q9BQQ3 440 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 SPATA16Q9BXB7 569 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 USP29Q9HBJ7 922 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.12□□□□□ -0.31
HMGB2-205ENST00000511316 PLK2Q9NYY3 685 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 STK39Q9UEW8 545 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 UBQLN1Q9UMX0 589 aaKnown RBP13.12□□□□□ -0.31
HMGB2-205ENST00000511316 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.12□□□□□ -0.31
HMGB2-205ENST00000511316 DERAQ9Y315 318 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 BDP1A6H8Y1 2624 aa13.12□□□□□ -0.31
HMGB2-205ENST00000511316 NCOR1O75376 2440 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 GOLGA8QA0A0J9YX86 632 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.11□□□□□ -0.31
HMGB2-205ENST00000511316 GOLGA8OA6NCC3 632 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 GOLGA8NF8WBI6 632 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 CASQ2O14958 399 aaPredicted RBP13.11□□□□□ -0.31
HMGB2-205ENST00000511316 KCNN4O15554 427 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 ALDH1A2O94788 518 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 ADSLP30566 484 aaPredicted RBP13.11□□□□□ -0.31
HMGB2-205ENST00000511316 SCNN1AP37088 669 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 CLCN4P51793 760 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 PRKAA2P54646 552 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 MRPS5P82675 430 aaKnown RBP13.11□□□□□ -0.31
HMGB2-205ENST00000511316 CDC16Q13042 620 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 GRM2Q14416 872 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 CCDC153Q494R4 210 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 FAM102AQ5T9C2 384 aaPredicted RBP13.11□□□□□ -0.31
HMGB2-205ENST00000511316 FAM171A1Q5VUB5 890 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 STEAP4Q687X5 459 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 PRSS55Q6UWB4 352 aaPredicted RBP13.11□□□□□ -0.31
HMGB2-205ENST00000511316 ALYREFQ86V81 257 aaKnown RBP13.11□□□□□ -0.31
HMGB2-205ENST00000511316 RASSF3Q86WH2 238 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 JOSD2Q8TAC2 188 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 DEPDC1BQ8WUY9 529 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 ELMO3Q96BJ8 720 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 TMEM176AQ96HP8 235 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 PANX3Q96QZ0 392 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 HAPLN3Q96S86 360 aa13.11□□□□□ -0.31
HMGB2-205ENST00000511316 MRPL17Q9NRX2 175 aaKnown RBP13.11□□□□□ -0.31
HMGB2-205ENST00000511316 C6orf203Q9P0P8 240 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms