RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 TTLL3Q9Y4R7 772 aa17.82■□□□□ 0.44
RNF4-209ENST00000507784 DNALI1O14645 258 aaPredicted RBP17.81■□□□□ 0.44
RNF4-209ENST00000507784 ZBTB24O43167 697 aaPredicted RBP17.81■□□□□ 0.44
RNF4-209ENST00000507784 HOXC11O43248 304 aaPredicted RBP17.81■□□□□ 0.44
RNF4-209ENST00000507784 OPHN1O60890 802 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 PABPC1P11940 636 aaKnown RBP17.81■□□□□ 0.44
RNF4-209ENST00000507784 ITIH2P19823 946 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 LMAN1P49257 510 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 CARSP49589 748 aaKnown RBP17.81■□□□□ 0.44
RNF4-209ENST00000507784 RENBPP51606 427 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 VSNL1P62760 191 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 IFI35P80217 286 aaPredicted RBP17.81■□□□□ 0.44
RNF4-209ENST00000507784 BASP1P80723 227 aaKnown RBP17.81■□□□□ 0.44
RNF4-209ENST00000507784 SLC12A1Q13621 1099 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 LBRQ14739 615 aaKnown RBP17.81■□□□□ 0.44
RNF4-209ENST00000507784 PITRM1Q5JRX3 1037 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 FAXCQ5TGI0 409 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 RNF43Q68DV7 783 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 ITPRIPL1Q6GPH6 555 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 PTCRAQ6ISU1 281 aaPredicted RBP17.81■□□□□ 0.44
RNF4-209ENST00000507784 PLCD3Q8N3E9 789 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 BBS5Q8N3I7 341 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.81■□□□□ 0.44
RNF4-209ENST00000507784 BBOF1Q8ND07 529 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 MAML1Q92585 1016 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 RUBCNQ92622 972 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 IL12RB2Q99665 862 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 SLC2A11Q9BYW1 496 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 NT5MQ9NPB1 228 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 RAB6BQ9NRW1 208 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 LIMD1Q9UGP4 676 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 RSPH14Q9UHP6 348 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 GGA2Q9UJY4 613 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 TRHDEQ9UKU6 1024 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 TPX2Q9ULW0 747 aaKnown RBP17.81■□□□□ 0.44
RNF4-209ENST00000507784 ACTL7AQ9Y615 435 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 LAMA3Q16787 3333 aa17.81■□□□□ 0.44
RNF4-209ENST00000507784 MIA3Q5JRA6 1907 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 ANHXE9PGG2 379 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 HLA-FP30511 346 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 MMP13P45452 471 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 SLC6A11P48066 632 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 DGKGP49619 791 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 ITGA8P53708 1063 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 DRG2P55039 364 aaKnown RBP17.8■□□□□ 0.44
RNF4-209ENST00000507784 PLTPP55058 493 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 SLC10A7Q0GE19 358 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 HNRNPDQ14103 355 aaKnown RBP17.8■□□□□ 0.44
RNF4-209ENST00000507784 ZNF235Q14590 738 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 AAK1Q2M2I8 961 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 PLEKHG6Q3KR16 790 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 TMCO4Q5TGY1 634 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 LINGO4Q6UY18 593 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 PCGF5Q86SE9 256 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 CSGALNACT1Q8TDX6 532 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 ALG14Q96F25 216 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 TEKT5Q96M29 485 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 ZNF599Q96NL3 588 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 C2orf49Q9BVC5 232 aaPredicted RBP17.8■□□□□ 0.44
RNF4-209ENST00000507784 ETNK1Q9HBU6 452 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 GTSE1Q9NYZ3 720 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 WHRNQ9P202 907 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 VPS51Q9UID3 782 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 OR51B4Q9Y5P0 310 aa17.8■□□□□ 0.44
RNF4-209ENST00000507784 BHMG1C9JSJ3 638 aaPredicted RBP17.79■□□□□ 0.44
RNF4-209ENST00000507784 E7EVH7 732 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 TRIM24O15164 1050 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 CACNG3O60359 315 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 METTL18O95568 372 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 HLA-DQB2P05538 268 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 TUBBP07437 444 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 NFKB1P19838 968 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 IVDP26440 423 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 PSMB4P28070 264 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 FDFT1P37268 417 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 PLK1P53350 603 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 ARF5P84085 180 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 CUL1Q13616 776 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 PRPSAP1Q14558 356 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 SMAD2Q15796 467 aaKnown RBP17.79■□□□□ 0.44
RNF4-209ENST00000507784 PARP6Q2NL67 630 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 ITPRIPL2Q3MIP1 535 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 SYCP2LQ5T4T6 812 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 GRAMD4Q6IC98 578 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 RETSATQ6NUM9 610 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 CCNI2Q6ZMN8 369 aaPredicted RBP17.79■□□□□ 0.44
RNF4-209ENST00000507784 C12orf40Q86WS4 652 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 DCAF4L2Q8NA75 395 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 FATE1Q969F0 183 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 LMLNQ96KR4 655 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 CINPQ9BW66 212 aaPredicted RBP17.79■□□□□ 0.44
RNF4-209ENST00000507784 PDFQ9HBH1 243 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 GLOD4Q9HC38 313 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 GRHL1Q9NZI5 618 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 INTS6Q9UL03 887 aaKnown RBP17.79■□□□□ 0.44
RNF4-209ENST00000507784 NFU1Q9UMS0 254 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 FAM50BQ9Y247 325 aa17.79■□□□□ 0.44
RNF4-209ENST00000507784 MYO18AQ92614 2054 aaKnown RBP17.78■□□□□ 0.44
RNF4-209ENST00000507784 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.78■□□□□ 0.44
RNF4-209ENST00000507784 OTOL1A6NHN0 477 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms