RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 SLC24A3Q9HC58 644 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 CLIC5Q9NZA1 410 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 SFMBT1Q9UHJ3 866 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 KCND3Q9UK17 655 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 HS3ST3A1Q9Y663 406 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 COL27A1Q8IZC6 1860 aaPredicted RBP7.44□□□□□ -1.22
VCAN-207ENST00000507162 CAPN5O15484 640 aaPredicted RBP7.43□□□□□ -1.22
VCAN-207ENST00000507162 GCNT3O95395 438 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 PAK4O96013 591 aaPredicted RBP7.43□□□□□ -1.22
VCAN-207ENST00000507162 SLFN14P0C7P3 912 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 OAS2P29728 719 aaKnown RBP7.43□□□□□ -1.22
VCAN-207ENST00000507162 UGT1A3P35503 534 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 PRPHP41219 470 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 STK19P49842 368 aaPredicted RBP7.43□□□□□ -1.22
VCAN-207ENST00000507162 TOB1P50616 345 aaPredicted RBP7.43□□□□□ -1.22
VCAN-207ENST00000507162 NDST1P52848 882 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 COPB1P53618 953 aaKnown RBP7.43□□□□□ -1.22
VCAN-207ENST00000507162 TAS2R38P59533 333 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 ZNF445P59923 1031 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 ZFP36L1Q07352 338 aaKnown RBP7.43□□□□□ -1.22
VCAN-207ENST00000507162 ELAVL3Q14576 367 aaKnown RBP7.43□□□□□ -1.22
VCAN-207ENST00000507162 TRIP4Q15650 581 aaPredicted RBP7.43□□□□□ -1.22
VCAN-207ENST00000507162 PITRM1Q5JRX3 1037 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 ATP1A1-AS1Q5TC04 95 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 FAXCQ5TGI0 409 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 PIK3R6Q5UE93 754 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 CCDC186Q7Z3E2 898 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 WDR49Q8IV35 697 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 KDM1BQ8NB78 822 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 RASSF8Q8NHQ8 419 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 FIBINQ8TAL6 211 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 BTN2A2Q8WVV5 523 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 OR8D1Q8WZ84 308 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 SYAP1Q96A49 352 aaPredicted RBP7.43□□□□□ -1.22
VCAN-207ENST00000507162 SLC45A3Q96JT2 553 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 SPAG5Q96R06 1193 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 TAAR9Q96RI9 348 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 HAPLN3Q96S86 360 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 EPAS1Q99814 870 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 TM6SF1Q9BZW5 370 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 CDH19Q9H159 772 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 RUBCNLQ9H714 662 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 GPN2Q9H9Y4 310 aaPredicted RBP7.43□□□□□ -1.22
VCAN-207ENST00000507162 APOBEC3BQ9UH17 382 aaKnown RBP7.43□□□□□ -1.22
VCAN-207ENST00000507162 PHTF1Q9UMS5 762 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 MAP4K5Q9Y4K4 846 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 RNF215Q9Y6U7 377 aa7.43□□□□□ -1.22
VCAN-207ENST00000507162 MAP1AP78559 2803 aaPredicted RBP7.43□□□□□ -1.22
VCAN-207ENST00000507162 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.42□□□□□ -1.22
VCAN-207ENST00000507162 C1QTNF3-AMACRE9PGA6 284 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 LMO7DNF2Z398 122 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 RAD1O60671 282 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 PPP1R37O75864 691 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 TCN2P20062 427 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 UBA7P41226 1012 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 YWHAGP61981 247 aaKnown RBP eCLIP7.42□□□□□ -1.22
VCAN-207ENST00000507162 EIF2B5Q13144 721 aaKnown RBP7.42□□□□□ -1.22
VCAN-207ENST00000507162 ME3Q16798 604 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 FSCBQ5H9T9 825 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 ZNF667Q5HYK9 610 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 TPRG1LQ5T0D9 272 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 SEL1L3Q68CR1 1132 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 NEK5Q6P3R8 708 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 CCNJLQ8IV13 435 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 UNC5BQ8IZJ1 945 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 APCDD1Q8J025 514 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 CRYBG2Q8N1P7 616 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 ARHGAP18Q8N392 663 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 FAM174AQ8TBP5 190 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 SCG3Q8WXD2 468 aaKnown RBP7.42□□□□□ -1.22
VCAN-207ENST00000507162 NDRG1Q92597 394 aaKnown RBP7.42□□□□□ -1.22
VCAN-207ENST00000507162 RAD54LQ92698 747 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 KIAA1143Q96AT1 154 aaPredicted RBP7.42□□□□□ -1.22
VCAN-207ENST00000507162 CYFIP2Q96F07 1278 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 LMLNQ96KR4 655 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 STRA6Q9BX79 667 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 INTS2Q9H0H0 1204 aaKnown RBP7.42□□□□□ -1.22
VCAN-207ENST00000507162 SDCBP2Q9H190 292 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 SEMA6CQ9H3T2 930 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 BLOC1S4Q9NUP1 217 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 HMGXB4Q9UGU5 601 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 ZFR2Q9UPR6 939 aaKnown RBP7.42□□□□□ -1.22
VCAN-207ENST00000507162 SLC5A6Q9Y289 635 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 NBEAL1Q6ZS30 2694 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 SHANK1Q9Y566 2161 aa7.42□□□□□ -1.22
VCAN-207ENST00000507162 RAD51BO15315 384 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 SPINT1O43278 529 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 REC8O95072 547 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 TSHRP16473 764 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 ITGB7P26010 798 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 ATICP31939 592 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 RABIFP47224 123 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 RPS24P62847 133 aaKnown RBP7.41□□□□□ -1.22
VCAN-207ENST00000507162 CCDC15Q0P6D6 951 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 BIRC3Q13489 604 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 CDH18Q13634 790 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 PTK2BQ14289 1009 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 C16orf72Q14CZ0 275 aa7.41□□□□□ -1.22
VCAN-207ENST00000507162 INPP5JQ15735 1006 aaPredicted RBP7.41□□□□□ -1.22
VCAN-207ENST00000507162 E2F4Q16254 413 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms