RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 ANK1P16157 1881 aa17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 F5H423 210 aaPredicted RBP17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 SLCO1B7G3V0H7 640 aa17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 TRIM24O15164 1050 aa17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 ZBTB11O95625 1053 aaPredicted RBP17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 TNNC2P02585 160 aa17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 POLBP06746 335 aa17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 DCKP27707 260 aa17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 BAATQ14032 418 aaPredicted RBP17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 DLG2Q15700 870 aa17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 ZBTB49Q6ZSB9 765 aa17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 CHSY3Q70JA7 882 aa17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 HTR3CQ8WXA8 447 aa17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 AGAP3Q96P47 875 aa17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 PPP1R10Q96QC0 940 aaKnown RBP17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 NPLQ9BXD5 320 aaPredicted RBP17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 CXorf21Q9HAI6 301 aa17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 MAFBQ9Y5Q3 323 aaPredicted RBP17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 CNTNAP1P78357 1384 aa17.39■□□□□ 0.37
SQSTM1-211ENST00000506690 CLRN2A0PK11 232 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 E7ENX8 843 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 K7EPI3 171 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 AKAP10O43572 662 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 BAIAP3O94812 1187 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 GRIA4P48058 902 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 CCDC92Q53HC0 331 aaPredicted RBP17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 SPANXN3Q5MJ09 141 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 LIPMQ5VYY2 423 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 NXNQ6DKJ4 435 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 CES3Q6UWW8 571 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 CDAN1Q8IWY9 1227 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 HACE1Q8IYU2 909 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 COLGALT1Q8NBJ5 622 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 ATXN7L3BQ96GX2 97 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 ANKRD36BP1Q96IX9 119 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 FCRL3Q96P31 734 aaPredicted RBP17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 GPATCH1Q9BRR8 931 aaKnown RBP17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 MRPL4Q9BYD3 311 aaKnown RBP17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 IL22Q9GZX6 179 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 UNC93B1Q9H1C4 597 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 PALMDQ9NP74 551 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 ACSS2Q9NR19 701 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 HES2Q9Y543 173 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 SOCS2O14508 198 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 PAPSS1O43252 624 aaPredicted RBP17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 B4GALT4O60513 344 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 C2P06681 752 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 CKMT2P17540 419 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 KIZQ2M2Z5 673 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 DCAF6Q58WW2 860 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 TREML2Q5T2D2 321 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 IRAK1BP1Q5VVH5 260 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 OGFOD2Q6N063 350 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 ZYG11AQ6WRX3 759 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 STRA8Q7Z7C7 330 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 TMEM151AQ8N4L1 468 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 TNIP2Q8NFZ5 429 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 URGCPQ8TCY9 931 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 LPGAT1Q92604 370 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 DHX35Q9H5Z1 703 aaKnown RBP17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 CAB39LQ9H9S4 337 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 GBA2Q9HCG7 927 aaPredicted RBP17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 DTLQ9NZJ0 730 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 SIX4Q9UIU6 781 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 MID2Q9UJV3 735 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 SARDHQ9UL12 918 aa17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 CNOT6Q9ULM6 557 aaKnown RBP17.38■□□□□ 0.37
SQSTM1-211ENST00000506690 VDRP11473 427 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 BMP2P12643 396 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 UGT1A6P19224 532 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 UGT1A1P22309 533 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 UGT1A4P22310 534 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 MYF6P23409 242 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 TTKP33981 857 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 UGT1A3P35503 534 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 UGT1A5P35504 534 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 RXRGP48443 463 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 DPYSL2Q16555 572 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 NIPAL1Q6NVV3 410 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 XKR5Q6UX68 686 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 PCDH20Q8N6Y1 951 aaKnown RBP17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 MFSD2AQ8NA29 543 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 ACE2Q9BYF1 805 aaPredicted RBP17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 A0A1W2PPW3 197 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 YDJCA8MPS7 323 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 KCNU1A8MYU2 1149 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 DLGAP1O14490 977 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 GIPC1O14908 333 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 XPOTO43592 962 aaKnown RBP17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 KRT19P08727 400 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 GNAO1P09471 354 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 CD247P20963 164 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 PRKAA2P54646 552 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 PRAMEP78395 509 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 PRKCQQ04759 706 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 MOGQ16653 247 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 BSPRYQ5W0U4 402 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 TTC33Q6PID6 262 aaPredicted RBP17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 LSMEM2Q8N112 164 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 ZNF786Q8N393 782 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms