RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 CCDC97Q96F63 343 aaPredicted RBP7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 SLC39A13Q96H72 371 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 EPAS1Q99814 870 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 ZSWIM1Q9BR11 485 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 ARHGAP9Q9BRR9 750 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 DUSP23Q9BVJ7 150 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 FAM204AQ9H8W3 233 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 VPS28Q9UK41 221 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 PPM1HQ9ULR3 514 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 ENTPD2Q9Y5L3 495 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 U3KQA8 63 aa7.08□□□□□ -1.28
NPIPB3-203ENST00000504841 TCAF2A6NFQ2 919 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 H3BM21 787 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 RNF225M0QZC1 329 aaPredicted RBP7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 MCF2LO15068 1137 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 SCAMP1O15126 338 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 CASC3O15234 703 aaKnown RBP7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 ALOX15BO15296 676 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 TRUB2O95900 331 aaKnown RBP7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 MYL1P05976 194 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 CTSLP07711 333 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 HSP90AA1P07900 732 aaKnown RBP7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 PAEPP09466 180 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 SYKP43405 635 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 HNRNPKP61978 463 aaKnown RBP eCLIP7.07□□□□□ -1.282e-11■■■□□ 15.6
NPIPB3-203ENST00000504841 DPYDQ12882 1025 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 MMRN1Q13201 1228 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 SRSF6Q13247 344 aaKnown RBP7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 CLN3Q13286 438 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 NNTQ13423 1086 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 SLC12A1Q13621 1099 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 CNGA2Q16280 664 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 EDRF1Q3B7T1 1238 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 RABGAP1LQ5R372 815 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 PERM1Q5SV97 790 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 ZCCHC8Q6NZY4 707 aaKnown RBP7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 FBXL22Q6P050 247 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 JAMLQ86YT9 394 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 PPM1KQ8N3J5 372 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 UBR7Q8N806 425 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 EXD3Q8N9H8 876 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 CHST14Q8NCH0 376 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 LMX1AQ8TE12 382 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 SNRNP27Q8WVK2 155 aaKnown RBP7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 BTN2A3PQ96KV6 586 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 HSFY1Q96LI6 401 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 SLC46A1Q96NT5 459 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 RPRD1AQ96P16 312 aaPredicted RBP7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 NT5C1BQ96P26 610 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 KRTAP3-3Q9BYR6 98 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 KRTAP3-2Q9BYR7 98 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 MUC3BQ9H195 1237 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 IL17BQ9UHF5 180 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 USP25Q9UHP3 1055 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 SLC12A6Q9UHW9 1150 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 IPO11Q9UI26 975 aaKnown RBP7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 CFAP45Q9UL16 551 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 KIAA1257Q9ULG3 409 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 VANGL2Q9ULK5 521 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 ZFR2Q9UPR6 939 aaKnown RBP7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 PCDHGA10Q9Y5H3 936 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 MYO18BQ8IUG5 2567 aa7.07□□□□□ -1.28
NPIPB3-203ENST00000504841 CCDC187A0A096LP49 1063 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 POM121BA6NF01 834 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 KCNU1A8MYU2 1149 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 E5RJQ4 531 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 K7ERQ8 282 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 RNF103O00237 685 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 SART1O43290 800 aaKnown RBP7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 ATP9BO43861 1147 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 SNAP91O60641 907 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 ENDOD1O94919 500 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 FAM87AP0C7U9 286 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 NME1P15531 152 aaKnown RBP7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 RRM1P23921 792 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 CHRNA3P32297 505 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 NDUFA8P51970 172 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 PLK1P53350 603 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 OXCT1P55809 520 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 NME3Q13232 169 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 C1orf61Q13536 156 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 PKP1Q13835 747 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 PDE1CQ14123 709 aaPredicted RBP7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 FZD2Q14332 565 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 NR0B2Q15466 257 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 TCEA2Q15560 299 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 TGIF1Q15583 401 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 TTC39BQ5VTQ0 682 aaPredicted RBP7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 DENND1BQ6P3S1 775 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 IGF2-ASQ6U949 168 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 LINGO4Q6UY18 593 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 ATG14Q6ZNE5 492 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 USP53Q70EK8 1073 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 ERN2Q76MJ5 926 aaKnown RBP7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 RRAGAQ7L523 313 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 ABI3BPQ7Z7G0 1075 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 PARGQ86W56 976 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 LURAP1LQ8IV03 231 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 RBFAQ8N0V3 343 aa7.06□□□□□ -1.28
NPIPB3-203ENST00000504841 ARL14Q8N4G2 192 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms