RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 RETSATQ6NUM9 610 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 ZNF783Q6ZMS7 281 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 FAM131BQ86XD5 332 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 MDM1Q8TC05 714 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 SLC20A1Q8WUM9 679 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 RXFP2Q8WXD0 754 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 SERAC1Q96JX3 654 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 ZYG11BQ9C0D3 744 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 RETREG1Q9H6L5 497 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 ADAM22Q9P0K1 906 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 OR12D3Q9UGF7 316 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 SARDHQ9UL12 918 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 HS3ST2Q9Y278 367 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 SIK3Q9Y2K2 1263 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 SLCO1B1Q9Y6L6 691 aa12.25□□□□□ -0.45
MED28-203ENST00000503945 URB1O60287 2271 aaKnown RBP12.25□□□□□ -0.45
MED28-203ENST00000503945 IGLV3-10A0A075B6K4 115 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 A0A0D9SEW6 157 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 I6L893 689 aaPredicted RBP12.24□□□□□ -0.45
MED28-203ENST00000503945 TLR4O00206 839 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 CBX4O00257 560 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 PCDHGA12O60330 932 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 SNAP91O60641 907 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 RTN2O75298 545 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 ATXN1LP0C7T5 689 aaKnown RBP12.24□□□□□ -0.45
MED28-203ENST00000503945 CHRNA3P32297 505 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 NUDT1P36639 197 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 CTSKP43235 329 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 CLCN6P51797 869 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 ADPRHP54922 357 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 FMO1Q01740 532 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 CNTN1Q12860 1018 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 ITPR1Q14643 2758 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 STAT4Q14765 748 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 COL28A1Q2UY09 1125 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 CCDC14Q49A88 953 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 SOWAHCQ53LP3 525 aaPredicted RBP12.24□□□□□ -0.45
MED28-203ENST00000503945 KCNT1Q5JUK3 1230 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 FREM2Q5SZK8 3169 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 CCDC183Q5T5S1 534 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 Q6ZVU0 165 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 TFAP2DQ7Z6R9 452 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 PDZD3Q86UT5 571 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 MARCH9Q86YJ5 346 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 ZNF683Q8IZ20 524 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 EMC1Q8N766 993 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 TMIEQ8NEW7 156 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 PIP4K2CQ8TBX8 421 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 HNRNPLLQ8WVV9 542 aaKnown RBP12.24□□□□□ -0.45
MED28-203ENST00000503945 ORAI3Q9BRQ5 295 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 OSBPL2Q9H1P3 480 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 EBF2Q9HAK2 575 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 DYRK4Q9NR20 520 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 METTL5Q9NRN9 209 aaKnown RBP12.24□□□□□ -0.45
MED28-203ENST00000503945 TMPRSS4Q9NRS4 437 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 SEPT11Q9NVA2 429 aaKnown RBP12.24□□□□□ -0.45
MED28-203ENST00000503945 TOR4AQ9NXH8 423 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 PPARGC1AQ9UBK2 798 aaKnown RBP12.24□□□□□ -0.45
MED28-203ENST00000503945 VPS51Q9UID3 782 aa12.24□□□□□ -0.45
MED28-203ENST00000503945 ACACAQ13085 2346 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 ANKRD62A6NC57 917 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 GOLGA8CPA6NN73 597 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 LGALS16A8MUM7 142 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 H0Y8X5 98 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 K7ERQ8 282 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 PLK4O00444 970 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 EPHB6O15197 1021 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 MAGEC1O60732 1142 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 PRNPP04156 253 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 CALB1P05937 261 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 SRCP12931 536 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 UNGP13051 313 aaPredicted RBP12.23□□□□□ -0.45
MED28-203ENST00000503945 RRM1P23921 792 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 DRD3P35462 400 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 GRK6P43250 576 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 ARRB1P49407 418 aaPredicted RBP12.23□□□□□ -0.45
MED28-203ENST00000503945 CCT8P50990 548 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 DNA2P51530 1060 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 CDO1Q16878 200 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 POM121L1PQ3SYA9 428 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 PRAMEF14Q5SWL7 426 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 TRNP1Q6NT89 227 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 RWDD4Q6NW29 188 aaKnown RBP12.23□□□□□ -0.45
MED28-203ENST00000503945 LINGO4Q6UY18 593 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 TMPRSS7Q7RTY8 843 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 BNIPLQ7Z465 357 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 MFSD2AQ8NA29 543 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 OR2A12Q8NGT7 310 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 BAHD1Q8TBE0 780 aaPredicted RBP12.23□□□□□ -0.45
MED28-203ENST00000503945 SLC6A18Q96N87 628 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 ERGIC2Q96RQ1 377 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 PCDHB18PQ96TA0 734 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 PSMB7Q99436 277 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 C11orf70Q9BRQ4 267 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 SELENOOQ9BVL4 669 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 ATP13A1Q9HD20 1204 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 HPCAL4Q9UM19 191 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 DMTF1Q9Y222 760 aa12.23□□□□□ -0.45
MED28-203ENST00000503945 C2CD4BA6NLJ0 364 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 SIGLEC16A6NMB1 481 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms