RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 NEBLO76041 1014 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 SMC2O95347 1197 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 CCR1P32246 355 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 OXCT1P55809 520 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 CDK17Q00537 523 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 CETN1Q12798 172 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 ZNF177Q13360 481 aaPredicted RBP16.47■□□□□ 0.23
MUC1-220ENST00000498431 ARHGAP40Q5TG30 622 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 SEL1L3Q68CR1 1132 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 KLHL10Q6JEL2 608 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 HORMAD1Q86X24 394 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 WDTC1Q8N5D0 677 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 CHST14Q8NCH0 376 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 OR2A12Q8NGT7 310 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 RNF34Q969K3 372 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 ZNF578Q96N58 590 aaPredicted RBP16.47■□□□□ 0.23
MUC1-220ENST00000498431 CPXM1Q96SM3 734 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 OSBPL2Q9H1P3 480 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 BOD1L1Q8NFC6 3051 aa16.47■□□□□ 0.23
MUC1-220ENST00000498431 MAST4O15021 2626 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 COL6A6A6NMZ7 2263 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 KPNA3O00505 521 aaPredicted RBP16.46■□□□□ 0.23
MUC1-220ENST00000498431 SMAD6O43541 496 aaKnown RBP16.46■□□□□ 0.23
MUC1-220ENST00000498431 CNTN5O94779 1100 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 SLC2A3P11169 496 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 HNRNPA2B1P22626 353 aaKnown RBP16.46■□□□□ 0.23
MUC1-220ENST00000498431 RRM1P23921 792 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 GNA15P30679 374 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 CHRNA3P32297 505 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 MEA1Q16626 185 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 HS1BP3Q53T59 392 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 TAF1BQ53T94 588 aaPredicted RBP16.46■□□□□ 0.23
MUC1-220ENST00000498431 OR6B2Q6IFH4 312 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 GJB7Q6PEY0 223 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 TRIM59Q8IWR1 403 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 DHTKD1Q96HY7 919 aaPredicted RBP16.46■□□□□ 0.23
MUC1-220ENST00000498431 DEPDC7Q96QD5 511 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 GTPBP4Q9BZE4 634 aaKnown RBP16.46■□□□□ 0.23
MUC1-220ENST00000498431 MUC3BQ9H195 1237 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 UBE2TQ9NPD8 197 aaPredicted RBP16.46■□□□□ 0.23
MUC1-220ENST00000498431 ASCL3Q9NQ33 180 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 ANLNQ9NQW6 1124 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 NLGN3Q9NZ94 848 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 HS3ST2Q9Y278 367 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 TBC1D30Q9Y2I9 924 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 MYO18BQ8IUG5 2567 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 PIEZO2Q9H5I5 2752 aa16.46■□□□□ 0.23
MUC1-220ENST00000498431 A0A1W2PNU3 283 aaPredicted RBP16.45■□□□□ 0.22
MUC1-220ENST00000498431 CYSRT1A8MQ03 144 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 I6L893 689 aaPredicted RBP16.45■□□□□ 0.22
MUC1-220ENST00000498431 J3QKU1 62 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 MED7O43513 233 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 PAGE1O75459 146 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 DXOO77932 396 aaKnown RBP16.45■□□□□ 0.22
MUC1-220ENST00000498431 BMP6P22004 513 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 AKT2P31751 481 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 LSSP48449 732 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 TMPRSS3P57727 454 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 NME3Q13232 169 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 TMEM259Q4ZIN3 620 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 ALFQ53S48 1182 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 OTUD1Q5VV17 481 aaPredicted RBP16.45■□□□□ 0.22
MUC1-220ENST00000498431 NEK5Q6P3R8 708 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 ABI3BPQ7Z7G0 1075 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 PASD1Q8IV76 773 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 ATP11CQ8NB49 1132 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.45■□□□□ 0.22
MUC1-220ENST00000498431 SIK2Q9H0K1 926 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 POLR1BQ9H9Y6 1135 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 DNAJC28Q9NX36 388 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 VPS51Q9UID3 782 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 MAN1B1Q9UKM7 699 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 ATP6V1DQ9Y5K8 247 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 SNX10Q9Y5X0 201 aa16.45■□□□□ 0.22
MUC1-220ENST00000498431 BECN2A8MW95 431 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 PPP1R3GB7ZBB8 358 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 K7ESM1 405 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 SCAMP1O15126 338 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 KLK10O43240 276 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 CLDN11O75508 207 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 PCDH8O95206 1070 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 CDH4P55283 916 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 APBA1Q02410 837 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 STIM1Q13586 685 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 LY6DQ14210 128 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 FGL2Q14314 439 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 C5orf22Q49AR2 442 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 BROXQ5VW32 411 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 LINGO4Q6UY18 593 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 Q6ZSR6 202 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 FAM183BPQ6ZVS7 135 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 PTAR1Q7Z6K3 402 aaPredicted RBP16.44■□□□□ 0.22
MUC1-220ENST00000498431 TMIEQ8NEW7 156 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 GRIN3AQ8TCU5 1115 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 KCNE4Q8WWG9 221 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 NELFBQ8WX92 580 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 VCPIP1Q96JH7 1222 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 BMFQ96LC9 184 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 PPP1R9BQ96SB3 815 aa16.44■□□□□ 0.22
MUC1-220ENST00000498431 TNKS2Q9H2K2 1166 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms