RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 RUFY2Q8WXA3 655 aa4.08□□□□□ -1.76
CLK1-214ENST00000496205 RFFLQ8WZ73 363 aa4.08□□□□□ -1.76
CLK1-214ENST00000496205 ZNF845Q96IR2 970 aaPredicted RBP4.08□□□□□ -1.76
CLK1-214ENST00000496205 ZNF347Q96SE7 839 aa4.08□□□□□ -1.76
CLK1-214ENST00000496205 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.08□□□□□ -1.76
CLK1-214ENST00000496205 HTATIP2Q9BUP3 242 aa4.08□□□□□ -1.76
CLK1-214ENST00000496205 RNF26Q9BY78 433 aaPredicted RBP4.08□□□□□ -1.76
CLK1-214ENST00000496205 FRMD8Q9BZ67 464 aaPredicted RBP4.08□□□□□ -1.76
CLK1-214ENST00000496205 TAOK3Q9H2K8 898 aa4.08□□□□□ -1.76
CLK1-214ENST00000496205 SEMA4BQ9NPR2 832 aaPredicted RBP4.08□□□□□ -1.76
CLK1-214ENST00000496205 PKP3Q9Y446 797 aa4.08□□□□□ -1.76
CLK1-214ENST00000496205 SPATA31A1Q5TZJ5 1347 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 A0A1W2PPH5 198 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 SH2D7A6NKC9 451 aaPredicted RBP4.07□□□□□ -1.76
CLK1-214ENST00000496205 ERVV-2B6SEH9 535 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 PRSS44E7EML9 344 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 UBE2Q2LH0YL09 131 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 H3BNX3 289 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 BAIAP3O94812 1187 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 TOMM40O96008 361 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 F9P00740 461 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 PSG1P11464 419 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 TYK2P29597 1187 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 PSMC2P35998 433 aaKnown RBP4.07□□□□□ -1.76
CLK1-214ENST00000496205 PGM1P36871 562 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 SOX2P48431 317 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 DCAF7P61962 342 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 GHRHRQ02643 423 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 FOXD4Q12950 439 aaPredicted RBP4.07□□□□□ -1.76
CLK1-214ENST00000496205 BAK1Q16611 211 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 NFIL3Q16649 462 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 AP5B1Q2VPB7 878 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 GXYLT1Q4G148 440 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 FBXO43Q4G163 708 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 WDR78Q5VTH9 848 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 CCDC30Q5VVM6 783 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 DENND2CQ68D51 928 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 TMEM65Q6PI78 240 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 ZNF474Q6S9Z5 364 aaPredicted RBP4.07□□□□□ -1.76
CLK1-214ENST00000496205 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.07□□□□□ -1.76
CLK1-214ENST00000496205 RHPN2Q8IUC4 686 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 ZNF548Q8NEK5 533 aaPredicted RBP4.07□□□□□ -1.76
CLK1-214ENST00000496205 TDRD7Q8NHU6 1098 aaKnown RBP4.07□□□□□ -1.76
CLK1-214ENST00000496205 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.07□□□□□ -1.76
CLK1-214ENST00000496205 UCMAQ8WVF2 138 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 IGFBPL1Q8WX77 278 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 IP6K1Q92551 441 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 CENPIQ92674 756 aaPredicted RBP4.07□□□□□ -1.76
CLK1-214ENST00000496205 HDAC2Q92769 488 aaKnown RBP4.07□□□□□ -1.76
CLK1-214ENST00000496205 CELF1Q92879 486 aaKnown RBP4.07□□□□□ -1.76
CLK1-214ENST00000496205 APOPT1Q96IL0 206 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 HS6ST2Q96MM7 605 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 SIGLEC11Q96RL6 698 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 CHCHD6Q9BRQ6 235 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 TRMOQ9BU70 441 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 TM2D2Q9BX73 214 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 SLC25A18Q9H1K4 315 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 JMJD4Q9H9V9 463 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 HEY2Q9UBP5 337 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 FBXO4Q9UKT5 387 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 SQORQ9Y6N5 450 aa4.07□□□□□ -1.76
CLK1-214ENST00000496205 SYN3O14994 580 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 LDLRAD4O15165 306 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 USO1O60763 962 aaKnown RBP4.06□□□□□ -1.76
CLK1-214ENST00000496205 RTN3O95197 1032 aaPredicted RBP4.06□□□□□ -1.76
CLK1-214ENST00000496205 WEE2P0C1S8 567 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 HNF1BP35680 557 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 PTPN9P43378 593 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 MTNR1AP48039 350 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 GPR68Q15743 365 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 RUNDC3AQ59EK9 446 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 ZNF667Q5HYK9 610 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 SLC22A25Q6T423 547 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 LRRC8DQ7L1W4 858 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 MON1AQ86VX9 555 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 TMEM200AQ86VY9 491 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 BRSK2Q8IWQ3 736 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 ENDOVQ8N8Q3 282 aaKnown RBP4.06□□□□□ -1.76
CLK1-214ENST00000496205 ZNF398Q8TD17 642 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 CUL5Q93034 780 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 EYA3Q99504 573 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 MPHOSPH8Q99549 860 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 BARD1Q99728 777 aaKnown RBP4.06□□□□□ -1.76
CLK1-214ENST00000496205 ABHD14AQ9BUJ0 271 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 Q9N2J8 555 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 TXNRD2Q9NNW7 524 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 POT1Q9NUX5 634 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 TMEM184CQ9NVA4 438 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.06□□□□□ -1.76
CLK1-214ENST00000496205 TMEM248Q9NWD8 314 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 MDFICQ9P1T7 246 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 UPB1Q9UBR1 384 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 SLC25A10Q9UBX3 287 aaPredicted RBP4.06□□□□□ -1.76
CLK1-214ENST00000496205 HEMK1Q9Y5R4 338 aaPredicted RBP4.06□□□□□ -1.76
CLK1-214ENST00000496205 SIRT4Q9Y6E7 314 aaPredicted RBP4.06□□□□□ -1.76
CLK1-214ENST00000496205 SCINQ9Y6U3 715 aa4.06□□□□□ -1.76
CLK1-214ENST00000496205 TCF20Q9UGU0 1960 aaKnown RBP4.05□□□□□ -1.76
CLK1-214ENST00000496205 CCDC196A0A1B0GTZ2 297 aa4.05□□□□□ -1.76
CLK1-214ENST00000496205 TCRBV7S3A2A0A539 114 aa4.05□□□□□ -1.76
CLK1-214ENST00000496205 TNPO2O14787 897 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms