RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 RNASE9P60153 205 aaKnown RBP22.63■■□□□ 1.21
HDDC3-203ENST00000494993 ACAP1Q15027 740 aa22.63■■□□□ 1.21
HDDC3-203ENST00000494993 TPD52L1Q16890 204 aaPredicted RBP22.63■■□□□ 1.21
HDDC3-203ENST00000494993 PIP5KL1Q5T9C9 394 aa22.63■■□□□ 1.21
HDDC3-203ENST00000494993 ATP11CQ8NB49 1132 aa22.63■■□□□ 1.21
HDDC3-203ENST00000494993 TMEM35BQ8NCS4 154 aa22.63■■□□□ 1.21
HDDC3-203ENST00000494993 NT5C3BQ969T7 300 aa22.63■■□□□ 1.21
HDDC3-203ENST00000494993 NXPE2Q96DL1 559 aa22.63■■□□□ 1.21
HDDC3-203ENST00000494993 PGAP3Q96FM1 320 aaPredicted RBP22.63■■□□□ 1.21
HDDC3-203ENST00000494993 LRIG1Q96JA1 1093 aa22.63■■□□□ 1.21
HDDC3-203ENST00000494993 CCDC114Q96M63 670 aa22.63■■□□□ 1.21
HDDC3-203ENST00000494993 CA5BQ9Y2D0 317 aa22.63■■□□□ 1.21
HDDC3-203ENST00000494993 SNX10Q9Y5X0 201 aa22.63■■□□□ 1.21
HDDC3-203ENST00000494993 ASXL3Q9C0F0 2248 aa22.62■■□□□ 1.21
HDDC3-203ENST00000494993 RNGTTO60942 597 aaKnown RBP22.62■■□□□ 1.21
HDDC3-203ENST00000494993 F9P00740 461 aa22.62■■□□□ 1.21
HDDC3-203ENST00000494993 CHRNA3P32297 505 aa22.62■■□□□ 1.21
HDDC3-203ENST00000494993 CDH5P33151 784 aaPredicted RBP22.62■■□□□ 1.21
HDDC3-203ENST00000494993 DEUP1Q05D60 604 aa22.62■■□□□ 1.21
HDDC3-203ENST00000494993 SOWAHCQ53LP3 525 aaPredicted RBP22.62■■□□□ 1.21
HDDC3-203ENST00000494993 C6orf118Q5T5N4 469 aa22.62■■□□□ 1.21
HDDC3-203ENST00000494993 HES3Q5TGS1 186 aa22.62■■□□□ 1.21
HDDC3-203ENST00000494993 DPY19L2P1Q6NXN4 242 aa22.62■■□□□ 1.21
HDDC3-203ENST00000494993 FBXL19Q6PCT2 694 aa22.62■■□□□ 1.21
HDDC3-203ENST00000494993 SETD3Q86TU7 594 aaPredicted RBP22.62■■□□□ 1.21
HDDC3-203ENST00000494993 DCAF4L2Q8NA75 395 aa22.62■■□□□ 1.21
HDDC3-203ENST00000494993 OR2A12Q8NGT7 310 aa22.62■■□□□ 1.21
HDDC3-203ENST00000494993 PDCL3Q9H2J4 239 aa22.62■■□□□ 1.21
HDDC3-203ENST00000494993 PAXBP1Q9Y5B6 917 aa22.62■■□□□ 1.21
HDDC3-203ENST00000494993 DRGXA6NNA5 263 aa22.61■■□□□ 1.21
HDDC3-203ENST00000494993 K7ERQ8 282 aa22.61■■□□□ 1.21
HDDC3-203ENST00000494993 KPNA3O00505 521 aaPredicted RBP22.61■■□□□ 1.21
HDDC3-203ENST00000494993 CKMT2P17540 419 aa22.61■■□□□ 1.21
HDDC3-203ENST00000494993 RRM1P23921 792 aa22.61■■□□□ 1.21
HDDC3-203ENST00000494993 SCNN1AP37088 669 aa22.61■■□□□ 1.21
HDDC3-203ENST00000494993 GABRB2P47870 512 aa22.61■■□□□ 1.21
HDDC3-203ENST00000494993 ILKQ13418 452 aa22.61■■□□□ 1.21
HDDC3-203ENST00000494993 LRRC31Q6UY01 552 aa22.61■■□□□ 1.21
HDDC3-203ENST00000494993 FAM114A1Q8IWE2 563 aa22.61■■□□□ 1.21
HDDC3-203ENST00000494993 TMEM145Q8NBT3 493 aa22.61■■□□□ 1.21
HDDC3-203ENST00000494993 TMIEQ8NEW7 156 aa22.61■■□□□ 1.21
HDDC3-203ENST00000494993 ARRDC3Q96B67 414 aa22.61■■□□□ 1.21
HDDC3-203ENST00000494993 C18orf8Q96DM3 657 aa22.61■■□□□ 1.21
HDDC3-203ENST00000494993 KLHDC7BQ96G42 594 aa22.61■■□□□ 1.21
HDDC3-203ENST00000494993 TBCBQ99426 244 aa22.61■■□□□ 1.21
HDDC3-203ENST00000494993 NDST4Q9H3R1 872 aa22.61■■□□□ 1.21
HDDC3-203ENST00000494993 SMG1Q96Q15 3661 aaKnown RBP22.6■■□□□ 1.21
HDDC3-203ENST00000494993 A0A0D9SEW6 157 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 A0A1W2PQU0 124 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 SLC31A1O15431 190 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 SMAD6O43541 496 aaKnown RBP22.6■■□□□ 1.21
HDDC3-203ENST00000494993 SDC3O75056 442 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 CLCN6P51797 869 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 CCDC15Q0P6D6 951 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 TARDBPQ13148 414 aaKnown RBP eCLIP22.6■■□□□ 1.21
HDDC3-203ENST00000494993 RAPGEF1Q13905 1077 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 DRAP1Q14919 205 aaPredicted RBP22.6■■□□□ 1.21
HDDC3-203ENST00000494993 SLC25A52Q3SY17 297 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 MIIPQ5JXC2 388 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 ACBD5Q5T8D3 534 aaPredicted RBP22.6■■□□□ 1.21
HDDC3-203ENST00000494993 FAM102AQ5T9C2 384 aaPredicted RBP22.6■■□□□ 1.21
HDDC3-203ENST00000494993 NEK5Q6P3R8 708 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 KLK6Q92876 244 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 C1orf74Q96LT6 269 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 MYOCQ99972 504 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 DYRK4Q9NR20 520 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 TMPRSS4Q9NRS4 437 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 TMEM51Q9NW97 253 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 MPP6Q9NZW5 540 aa22.6■■□□□ 1.21
HDDC3-203ENST00000494993 IGLV3-10A0A075B6K4 115 aa22.59■■□□□ 1.21
HDDC3-203ENST00000494993 PRNPP04156 253 aa22.59■■□□□ 1.21
HDDC3-203ENST00000494993 THEGLP0DJG4 465 aa22.59■■□□□ 1.21
HDDC3-203ENST00000494993 PRKCSHP14314 528 aaPredicted RBP22.59■■□□□ 1.21
HDDC3-203ENST00000494993 CYP11B1P15538 503 aa22.59■■□□□ 1.21
HDDC3-203ENST00000494993 PRLRP16471 622 aa22.59■■□□□ 1.21
HDDC3-203ENST00000494993 PROX2Q3B8N5 592 aa22.59■■□□□ 1.21
HDDC3-203ENST00000494993 VWA3BQ502W6 1294 aa22.59■■□□□ 1.21
HDDC3-203ENST00000494993 C22orf39Q6P5X5 142 aa22.59■■□□□ 1.21
HDDC3-203ENST00000494993 LINGO4Q6UY18 593 aa22.59■■□□□ 1.21
HDDC3-203ENST00000494993 TFAP2DQ7Z6R9 452 aa22.59■■□□□ 1.21
HDDC3-203ENST00000494993 HORMAD1Q86X24 394 aa22.59■■□□□ 1.21
HDDC3-203ENST00000494993 XYLT1Q86Y38 959 aa22.59■■□□□ 1.21
HDDC3-203ENST00000494993 CHST14Q8NCH0 376 aa22.59■■□□□ 1.21
HDDC3-203ENST00000494993 TUBGCP2Q9BSJ2 902 aa22.59■■□□□ 1.21
HDDC3-203ENST00000494993 FHOD1Q9Y613 1164 aa22.59■■□□□ 1.21
HDDC3-203ENST00000494993 RNF103O00237 685 aa22.58■■□□□ 1.21
HDDC3-203ENST00000494993 GLDCP23378 1020 aa22.58■■□□□ 1.21
HDDC3-203ENST00000494993 ACP1P24666 158 aa22.58■■□□□ 1.21
HDDC3-203ENST00000494993 OR1E1P30953 314 aa22.58■■□□□ 1.21
HDDC3-203ENST00000494993 FLT3P36888 993 aa22.58■■□□□ 1.21
HDDC3-203ENST00000494993 ZNF284Q2VY69 593 aa22.58■■□□□ 1.21
HDDC3-203ENST00000494993 ARTNQ5T4W7 220 aa22.58■■□□□ 1.21
HDDC3-203ENST00000494993 ERICH1Q86X53 443 aa22.58■■□□□ 1.21
HDDC3-203ENST00000494993 OR7D4Q8NG98 312 aa22.58■■□□□ 1.21
HDDC3-203ENST00000494993 DCBLD2Q96PD2 775 aa22.58■■□□□ 1.21
HDDC3-203ENST00000494993 NRSN2Q9GZP1 204 aa22.58■■□□□ 1.21
HDDC3-203ENST00000494993 IL36AQ9UHA7 158 aa22.58■■□□□ 1.21
HDDC3-203ENST00000494993 FAM170AA1A519 330 aa22.57■■□□□ 1.2
HDDC3-203ENST00000494993 TRIM38O00635 465 aa22.57■■□□□ 1.2
HDDC3-203ENST00000494993 SIGLEC6O43699 453 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms