RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 OR2A12Q8NGT7 310 aa11.94□□□□□ -0.5
VTI1A-208ENST00000494728 JOSD2Q8TAC2 188 aa11.94□□□□□ -0.5
VTI1A-208ENST00000494728 PIP4K2CQ8TBX8 421 aa11.94□□□□□ -0.5
VTI1A-208ENST00000494728 OR8D1Q8WZ84 308 aa11.94□□□□□ -0.5
VTI1A-208ENST00000494728 ARRDC3Q96B67 414 aa11.94□□□□□ -0.5
VTI1A-208ENST00000494728 ACE2Q9BYF1 805 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-208ENST00000494728 STK33Q9BYT3 514 aa11.94□□□□□ -0.5
VTI1A-208ENST00000494728 MUC3BQ9H195 1237 aa11.94□□□□□ -0.5
VTI1A-208ENST00000494728 HSD3B7Q9H2F3 369 aa11.94□□□□□ -0.5
VTI1A-208ENST00000494728 PDCL3Q9H2J4 239 aa11.94□□□□□ -0.5
VTI1A-208ENST00000494728 NLRC4Q9NPP4 1024 aa11.94□□□□□ -0.5
VTI1A-208ENST00000494728 AASDHPPTQ9NRN7 309 aa11.94□□□□□ -0.5
VTI1A-208ENST00000494728 FAM207AQ9NSI2 230 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-208ENST00000494728 NDFIP2Q9NV92 336 aa11.94□□□□□ -0.5
VTI1A-208ENST00000494728 SIK3Q9Y2K2 1263 aa11.94□□□□□ -0.5
VTI1A-208ENST00000494728 ACTL7AQ9Y615 435 aa11.94□□□□□ -0.5
VTI1A-208ENST00000494728 URB1O60287 2271 aaKnown RBP11.93□□□□□ -0.5
VTI1A-208ENST00000494728 TMEM8BA6NDV4 472 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 MCF2LO15068 1137 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 ZMPSTE24O75844 475 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 CYP1A1P04798 512 aaPredicted RBP11.93□□□□□ -0.5
VTI1A-208ENST00000494728 CD38P28907 300 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 NNMTP40261 264 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 C21orf59P57076 290 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 NXPH1P58417 271 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 POLR2FP61218 127 aaKnown RBP11.93□□□□□ -0.5
VTI1A-208ENST00000494728 ARF5P84085 180 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 SCAPQ12770 1279 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 PTP4A2Q12974 167 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 C15orf59Q2T9L4 293 aaPredicted RBP11.93□□□□□ -0.5
VTI1A-208ENST00000494728 MANEALQ5VSG8 457 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 C22orf39Q6P5X5 142 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 CCNI2Q6ZMN8 369 aaPredicted RBP11.93□□□□□ -0.5
VTI1A-208ENST00000494728 DCAF4L2Q8NA75 395 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 SLC30A5Q8TAD4 765 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 MDM1Q8TC05 714 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 ENOX1Q8TC92 643 aaKnown RBP11.93□□□□□ -0.5
VTI1A-208ENST00000494728 GRIN3AQ8TCU5 1115 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 VOPP1Q96AW1 172 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 SERAC1Q96JX3 654 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 PCDHB18PQ96TA0 734 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 ELF4Q99607 663 aaPredicted RBP11.93□□□□□ -0.5
VTI1A-208ENST00000494728 C11orf70Q9BRQ4 267 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 TNKS2Q9H2K2 1166 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 FANCLQ9NW38 375 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 PTPRQQ9UMZ3 2332 aa11.93□□□□□ -0.5
VTI1A-208ENST00000494728 TBC1D3DA0A087WVF3 549 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 TBC1D3IA0A087WXS9 549 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 TBC1D3EA0A087X179 549 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 TBC1D3KA0A087X1G2 549 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 FAM149AA5PLN7 773 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 TBC1D3FA6NER0 549 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-208ENST00000494728 TBC1D3LB9A6J9 549 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 FAM72CH0Y354 149 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 ALOX15BO15296 676 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 SRGAP2O75044 1071 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 CD160O95971 181 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 TBC1D3HP0C7X1 549 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 PRLRP16471 622 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 ZNF18P17022 549 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 MMP8P22894 467 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 EPHA8P29322 1005 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-208ENST00000494728 RDXP35241 583 aaKnown RBP11.92□□□□□ -0.5
VTI1A-208ENST00000494728 GRK6P43250 576 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 OXCT1P55809 520 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 ATP11AP98196 1134 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 CDR2Q01850 454 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 DNAJC3Q13217 504 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 CDO1Q16878 200 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 CCDC14Q49A88 953 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 CCDC157Q569K6 752 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 FAM72AQ5TYM5 149 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 TBC1D3GQ6DHY5 549 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 TBC1D3CQ6IPX1 549 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 NAPEPLDQ6IQ20 393 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 FAM72DQ6L9T8 149 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 APTXQ7Z2E3 356 aaKnown RBP11.92□□□□□ -0.5
VTI1A-208ENST00000494728 KANSL1Q7Z3B3 1105 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 FAM72BQ86X60 149 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 PROSER1Q86XN7 944 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 TBC1D3Q8IZP1 549 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-208ENST00000494728 ATP11CQ8NB49 1132 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 SAP25Q8TEE9 199 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 MYOCQ99972 504 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 FZD3Q9NPG1 666 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 RRN3Q9NYV6 651 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 APOBEC2Q9Y235 224 aaKnown RBP11.92□□□□□ -0.5
VTI1A-208ENST00000494728 WASF2Q9Y6W5 498 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 LRP4O75096 1905 aa11.92□□□□□ -0.5
VTI1A-208ENST00000494728 ASXL3Q9C0F0 2248 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 TLR4O00206 839 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 KPNA3O00505 521 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-208ENST00000494728 SLC7A4O43246 635 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 ENDOD1O94919 500 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 OR1E1P30953 314 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 CHRNA3P32297 505 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 SOX5P35711 763 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 COPB1P53618 953 aaKnown RBP11.91□□□□□ -0.5
VTI1A-208ENST00000494728 SNX16P57768 344 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 BNIP3Q12983 259 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms