RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 ESRP1Q6NXG1 681 aaKnown RBP7.01□□□□□ -1.29
FN1-225ENST00000494446 TMPRSS9Q7Z410 1059 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 ABI3BPQ7Z7G0 1075 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 PARGQ86W56 976 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 HORMAD1Q86X24 394 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 CCDC117Q8IWD4 279 aaPredicted RBP7.01□□□□□ -1.29
FN1-225ENST00000494446 APCDD1Q8J025 514 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 SDR16C5Q8N3Y7 309 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 RNF139Q8WU17 664 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 NDRG1Q92597 394 aaKnown RBP7.01□□□□□ -1.29
FN1-225ENST00000494446 NKD1Q969G9 470 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 CCDC74AQ96AQ1 378 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 FAM131CQ96AQ9 280 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 BMFQ96LC9 184 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 HEXIM2Q96MH2 286 aaKnown RBP7.01□□□□□ -1.29
FN1-225ENST00000494446 SPAG5Q96R06 1193 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 DUSP16Q9BY84 665 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 PRDM8Q9NQV8 689 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 DONSONQ9NYP3 566 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 SIRPGQ9P1W8 387 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 SPASTQ9UBP0 616 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 DKK3Q9UBP4 350 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 RABGEF1Q9UJ41 708 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 STOML2Q9UJZ1 356 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 HBS1LQ9Y450 684 aaKnown RBP7.01□□□□□ -1.29
FN1-225ENST00000494446 DAAM1Q9Y4D1 1078 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 USP3Q9Y6I4 520 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 SPG11Q96JI7 2443 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 LRP4O75096 1905 aa7.01□□□□□ -1.29
FN1-225ENST00000494446 A0A1W2PQM1 296 aa7□□□□□ -1.29
FN1-225ENST00000494446 TYW5A2RUC4 315 aaKnown RBP7□□□□□ -1.29
FN1-225ENST00000494446 EFCAB7A8K855 629 aa7□□□□□ -1.29
FN1-225ENST00000494446 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7□□□□□ -1.29
FN1-225ENST00000494446 C1QTNF3-AMACRE9PGA6 284 aa7□□□□□ -1.29
FN1-225ENST00000494446 YY2O15391 372 aa7□□□□□ -1.29
FN1-225ENST00000494446 NKX2-8O15522 239 aa7□□□□□ -1.29
FN1-225ENST00000494446 MSI1O43347 362 aaKnown RBP7□□□□□ -1.29
FN1-225ENST00000494446 BNIP3LO60238 219 aa7□□□□□ -1.29
FN1-225ENST00000494446 LATS1O95835 1130 aa7□□□□□ -1.29
FN1-225ENST00000494446 P4HA1P13674 534 aa7□□□□□ -1.29
FN1-225ENST00000494446 SLC11A2P49281 568 aa7□□□□□ -1.29
FN1-225ENST00000494446 CYP2J2P51589 502 aa7□□□□□ -1.29
FN1-225ENST00000494446 RPS24P62847 133 aaKnown RBP7□□□□□ -1.29
FN1-225ENST00000494446 CDH18Q13634 790 aa7□□□□□ -1.29
FN1-225ENST00000494446 NCOA4Q13772 614 aa7□□□□□ -1.29
FN1-225ENST00000494446 PDE1CQ14123 709 aaPredicted RBP7□□□□□ -1.29
FN1-225ENST00000494446 SEPT6Q14141 434 aa7□□□□□ -1.29
FN1-225ENST00000494446 EIF2S3LQ2VIR3 472 aaKnown RBP7□□□□□ -1.29
FN1-225ENST00000494446 DEFB109BQ30KR1 87 aa7□□□□□ -1.29
FN1-225ENST00000494446 RILPL1Q5EBL4 403 aa7□□□□□ -1.29
FN1-225ENST00000494446 PRRT3Q5FWE3 981 aa7□□□□□ -1.29
FN1-225ENST00000494446 PHF19Q5T6S3 580 aa7□□□□□ -1.29
FN1-225ENST00000494446 SEL1L3Q68CR1 1132 aa7□□□□□ -1.29
FN1-225ENST00000494446 NEK5Q6P3R8 708 aa7□□□□□ -1.29
FN1-225ENST00000494446 UNC93AQ86WB7 457 aa7□□□□□ -1.29
FN1-225ENST00000494446 RBFAQ8N0V3 343 aa7□□□□□ -1.29
FN1-225ENST00000494446 CFAP52Q8N1V2 620 aa7□□□□□ -1.29
FN1-225ENST00000494446 Q8N9G6 341 aaPredicted RBP7□□□□□ -1.29
FN1-225ENST00000494446 HJURPQ8NCD3 748 aaPredicted RBP7□□□□□ -1.29
FN1-225ENST00000494446 FAM174AQ8TBP5 190 aa7□□□□□ -1.29
FN1-225ENST00000494446 CPT1CQ8TCG5 803 aa7□□□□□ -1.29
FN1-225ENST00000494446 PDCD6IPQ8WUM4 868 aaKnown RBP7□□□□□ -1.29
FN1-225ENST00000494446 BTN2A2Q8WVV5 523 aa7□□□□□ -1.29
FN1-225ENST00000494446 APOBEC4Q8WW27 367 aaKnown RBP7□□□□□ -1.29
FN1-225ENST00000494446 EDEM1Q92611 657 aa7□□□□□ -1.29
FN1-225ENST00000494446 DNAJC19Q96DA6 116 aa7□□□□□ -1.29
FN1-225ENST00000494446 TWNKQ96RR1 684 aa7□□□□□ -1.29
FN1-225ENST00000494446 CMKLR1Q99788 373 aa7□□□□□ -1.29
FN1-225ENST00000494446 TCEAL2Q9H3H9 227 aaPredicted RBP7□□□□□ -1.29
FN1-225ENST00000494446 LRRN3Q9H3W5 708 aa7□□□□□ -1.29
FN1-225ENST00000494446 VRTNQ9H8Y1 702 aa7□□□□□ -1.29
FN1-225ENST00000494446 OLFML3Q9NRN5 406 aa7□□□□□ -1.29
FN1-225ENST00000494446 OLA1Q9NTK5 396 aaKnown RBP7□□□□□ -1.29
FN1-225ENST00000494446 PANK4Q9NVE7 773 aa7□□□□□ -1.29
FN1-225ENST00000494446 APOBEC3BQ9UH17 382 aaKnown RBP7□□□□□ -1.29
FN1-225ENST00000494446 GGT7Q9UJ14 662 aa7□□□□□ -1.29
FN1-225ENST00000494446 ZFR2Q9UPR6 939 aaKnown RBP7□□□□□ -1.29
FN1-225ENST00000494446 HS3ST3A1Q9Y663 406 aa7□□□□□ -1.29
FN1-225ENST00000494446 ANKRD36A6QL64 1941 aa6.99□□□□□ -1.29
FN1-225ENST00000494446 A0A1B0GTL3 188 aa6.99□□□□□ -1.29
FN1-225ENST00000494446 LMO7DNF2Z398 122 aa6.99□□□□□ -1.29
FN1-225ENST00000494446 K7EM74 188 aa6.99□□□□□ -1.29
FN1-225ENST00000494446 CLIC2O15247 247 aa6.99□□□□□ -1.29
FN1-225ENST00000494446 IRAK2O43187 625 aa6.99□□□□□ -1.29
FN1-225ENST00000494446 DUX1O43812 170 aa6.99□□□□□ -1.29
FN1-225ENST00000494446 ACSL4O60488 711 aa6.99□□□□□ -1.29
FN1-225ENST00000494446 EIF5BO60841 1220 aaKnown RBP6.99□□□□□ -1.29
FN1-225ENST00000494446 RABIFP47224 123 aa6.99□□□□□ -1.29
FN1-225ENST00000494446 CASP4P49662 377 aa6.99□□□□□ -1.29
FN1-225ENST00000494446 TKTL1P51854 596 aa6.99□□□□□ -1.29
FN1-225ENST00000494446 NEK4P51957 841 aa6.99□□□□□ -1.29
FN1-225ENST00000494446 EIF2B5Q13144 721 aaKnown RBP6.99□□□□□ -1.29
FN1-225ENST00000494446 TCEA2Q15560 299 aa6.99□□□□□ -1.29
FN1-225ENST00000494446 FAM133BQ5BKY9 247 aaKnown RBP6.99□□□□□ -1.29
FN1-225ENST00000494446 TPRG1LQ5T0D9 272 aa6.99□□□□□ -1.29
FN1-225ENST00000494446 PPP1R26Q5T8A7 1209 aaPredicted RBP6.99□□□□□ -1.29
FN1-225ENST00000494446 PIP5KL1Q5T9C9 394 aa6.99□□□□□ -1.29
FN1-225ENST00000494446 KYAT3Q6YP21 454 aaKnown RBP6.99□□□□□ -1.29
FN1-225ENST00000494446 SV2BQ7L1I2 683 aa6.99□□□□□ -1.29
FN1-225ENST00000494446 CACNA2D3Q8IZS8 1091 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms